Os07g0281800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase-2.
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Os07g0281800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde oxidase-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.32 | 0.459 | 6.6 | -2.47 | 0.422 | 1.33 | -0.589 | 2.4 | -0.257 | 9.64 | 19.9 | 10 | -- | -- |
| 99.1 | 0.464 | 6.65 | -2.91 | 0.426 | 1.49 | -0.147 | -- | -0.378 | 9.14 | 21.32 | 10 | -- | -- |
| 96.39 | 0.457 | 6.6 | -2.54 | 0.43 | 1.38 | -- | 2.18 | -0.276 | 9.16 | 19.9 | 10 | -- | -- |
| 99.11 | 0.464 | 6.65 | -2.91 | 0.428 | 1.52 | -- | -- | -0.383 | 8.83 | 21.36 | 10 | -- | -- |
| 106.16 | 0.483 | 6.63 | -2.62 | -- | 1.53 | -- | 1.87 | -0.308 | -- | 19.9 | 10 | -- | -- |
| 134.41 | 0.544 | 6.59 | -2.6 | 0.747 | -- | 0.169 | -- | -0.129 | 12.2 | -- | -- | -- | -- |
| 134.53 | 0.543 | 6.59 | -2.6 | 0.746 | -- | -- | -- | -0.128 | 12.2 | -- | -- | -- | -- |
| 108.92 | 0.486 | 6.66 | -2.92 | -- | 1.58 | -- | -- | -0.394 | -- | 21 | 3 | -- | -- |
| 304.85 | 0.818 | 6.54 | -- | 0.592 | 0.684 | -- | -- | 0.107 | 11.3 | 24.6 | 7 | -- | -- |
| 169.59 | 0.609 | 6.61 | -2.62 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 312.13 | 0.826 | 6.53 | -- | 0.783 | -- | -- | -- | 0.161 | 12.4 | -- | -- | -- | -- |
| 323.22 | 0.84 | 6.56 | -- | -- | 1.06 | -- | -- | 0.059 | -- | 24.2 | 4 | -- | -- |
| 350.68 | 0.874 | 6.54 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 2 | 90.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 8 | 92.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 13 | 92.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 23 | 94.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 33 | 95.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 35 | 95.35 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 36 | 95.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 37 | 95.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 39 | 95.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 40 | 95.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 56 | 95.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 57 | 95.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 58 | 96.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 61 | 96.08 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 63 | 96.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 67 | 96.17 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 70 | 96.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 84 | 96.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 90 | 96.84 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 97 | 97.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 105 | 97.33 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 110 | 97.37 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 137 | 97.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 142 | 97.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 178 | 98.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 200 | 99.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 211 | 99.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 221 | 99.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 251 | 99.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 274 | 99.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 287 | 100.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 288 | 100.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 318 | 100.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 349 | 100.70 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 366 | 100.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 439 | 101.29 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 469 | 101.47 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 566 | 101.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 585 | 102.08 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 587 | 102.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 619 | 102.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 658 | 102.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 671 | 102.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 697 | 102.34 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 729 | 102.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 11 |
| 734 | 102.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 812 | 102.58 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 842 | 102.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 859 | 102.68 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 875 | 102.71 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 881 | 102.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 992 | 102.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |