BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0281800 Os07g0281800|AK105707
(288 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27150.1 | chr2:11601952-11607014 FORWARD LENGTH=1333 338 2e-93
AT3G43600.1 | chr3:15512778-15517375 REVERSE LENGTH=1322 329 1e-90
AT1G04580.1 | chr1:1252212-1257510 REVERSE LENGTH=1338 327 4e-90
AT5G20960.1 | chr5:7116783-7122338 FORWARD LENGTH=1369 317 5e-87
AT4G34890.1 | chr4:16618736-16624983 REVERSE LENGTH=1362 117 8e-27
AT4G34900.1 | chr4:16625688-16631306 REVERSE LENGTH=1354 110 8e-25
AT1G02590.1 | chr1:552138-552761 REVERSE LENGTH=90 80 1e-15
>AT2G27150.1 | chr2:11601952-11607014 FORWARD LENGTH=1333
Length = 1332
Score = 338 bits (866), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/278 (60%), Positives = 204/278 (73%), Gaps = 1/278 (0%)
Query: 1 MTAFALGQLWPKGCEGLLDRIRVLQSDTLNLIQGGLTAGSTTSESSCAATLQACNMLIER 60
M A+ LG + +G E LLDRIRV+QSDTL +IQGG TAGSTTSESSC A C +L+ER
Sbjct: 1049 MVAYGLGMVKCEGNEKLLDRIRVVQSDTLGMIQGGFTAGSTTSESSCEAVRLCCVILVER 1108
Query: 61 LKPVMERLQLQ-SDTVSWDTLISQASQENINLSASAYWVPEQDSNFYLNYGAGTSEVEVD 119
LKP+M+++ ++ S +V+W+ LI QA + INLSAS + PE S YLNYG G SEVEVD
Sbjct: 1109 LKPIMDQMMMEKSGSVTWNILIQQAYGQYINLSASTLYKPEYSSMEYLNYGVGVSEVEVD 1168
Query: 120 LLTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGIGFFIYEEHQTNSDGLVISNSTW 179
L+TG I+RSD+IYDCGKSLNPAVDLGQ EG+F+QGIGFF+ EE+ T+ GLV+ TW
Sbjct: 1169 LVTGKTEILRSDIIYDCGKSLNPAVDLGQTEGAFVQGIGFFMMEEYTTDEKGLVVQQGTW 1228
Query: 180 DYKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEPAVVLGASVHCAVXXXXXXXXXXF 239
DYKIP+VDTIPK FN E++NTG+HK+RVLSSKASGEP ++L ASVHCA
Sbjct: 1229 DYKIPTVDTIPKHFNVEIVNTGHHKNRVLSSKASGEPPLLLAASVHCATRSAIREARKHS 1288
Query: 240 AGNNGSGSSLLTFQLDVPAPMTVVKELCGLDIVEKYLE 277
+N S F+L VPA M VVK LCGL VEKYL+
Sbjct: 1289 LSSNFIDGSDSEFELPVPATMPVVKSLCGLYSVEKYLQ 1326
>AT3G43600.1 | chr3:15512778-15517375 REVERSE LENGTH=1322
Length = 1321
Score = 329 bits (843), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/280 (57%), Positives = 205/280 (73%), Gaps = 8/280 (2%)
Query: 1 MTAFALGQLWPKGCEGLLDRIRVLQSDTLNLIQGGLTAGSTTSESSCAATLQACNMLIER 60
MT++ALG L G E LL++IRV+QSD+L+++QG T GSTTSE SCAA C L+ER
Sbjct: 1038 MTSYALGMLQCDGTEELLEKIRVIQSDSLSMVQGNFTGGSTTSEGSCAAVRLCCETLVER 1097
Query: 61 LKPVMERLQLQSDTVSWDTLISQASQENINLSASAYWVPEQDSNFYLNYGAGTSEVEVDL 120
LKP+MER ++W+ LISQA +++NLSAS + P+ YLNYG SEVEVDL
Sbjct: 1098 LKPLMER---SDGPITWNELISQAYAQSVNLSASDLYTPKDTPMQYLNYGTAVSEVEVDL 1154
Query: 121 LTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGIGFFIYEEHQTNSDGLVISNSTWD 180
+TG T++++D++YDCGKSLNPAVDLGQIEGSF+QG+GFF+ EE+ + +GL++++STW
Sbjct: 1155 VTGQTTVLQTDILYDCGKSLNPAVDLGQIEGSFVQGLGFFMLEEYIEDPEGLLLTDSTWT 1214
Query: 181 YKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEPAVVLGASVHCAVXXXXXXXXX--- 237
YKIP+VDTIPKQFN E+LN G H+ RVLSSKASGEP ++L ASVHCA
Sbjct: 1215 YKIPTVDTIPKQFNVEILNGGCHEKRVLSSKASGEPPLLLAASVHCATRQAVKEARKQLC 1274
Query: 238 XFAGNNGSGSSLLTFQLDVPAPMTVVKELCGLDIVEKYLE 277
+ G NGS S FQL VPA M VVKELCGLDI+E YLE
Sbjct: 1275 MWKGENGSSGS--AFQLPVPATMPVVKELCGLDIIESYLE 1312
>AT1G04580.1 | chr1:1252212-1257510 REVERSE LENGTH=1338
Length = 1337
Score = 327 bits (838), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/282 (55%), Positives = 205/282 (72%), Gaps = 5/282 (1%)
Query: 1 MTAFALGQLWPKGCEGLLDRIRVLQSDTLNLIQGGLTAGSTTSESSCAATLQACNMLIER 60
M A+ LG + +G + LL+RIR+LQ+DTL++ Q TAGSTTSE+ C A C +L+ER
Sbjct: 1051 MVAYGLGMIKCEGSDDLLERIRLLQTDTLSMSQSSYTAGSTTSENCCEAVRLCCGILVER 1110
Query: 61 LKPVMERLQLQSDTVSWDTLISQASQENINLSASAYWVPEQDSNFYLNYGAGTSEVEVDL 120
L+P M ++ + +V+WD LI QA+ ++++LSA ++ PE S YLNYG G SEVEVDL
Sbjct: 1111 LRPTMNQILENARSVTWDMLIQQANAQSVDLSARTFYKPESSSAEYLNYGVGASEVEVDL 1170
Query: 121 LTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGIGFFIYEEHQTNSDGLVISNSTWD 180
+TG IIRSD+IYDCGKSLNPAVDLGQIEG+F+QGIGFF+YEE+ TN +GLV TWD
Sbjct: 1171 VTGRTEIIRSDIIYDCGKSLNPAVDLGQIEGAFVQGIGFFMYEEYTTNENGLVNEEGTWD 1230
Query: 181 YKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEPAVVLGASVHCAVXXXXXXXXXXFA 240
YKIP++DTIPKQFN ++LN+G+HK+RVLSSKASGEP +++ ASVHCA +
Sbjct: 1231 YKIPTIDTIPKQFNVQILNSGHHKNRVLSSKASGEPPLLVAASVHCATRSAIREARKQYL 1290
Query: 241 G-----NNGSGSSLLTFQLDVPAPMTVVKELCGLDIVEKYLE 277
++ L F+L VPA M VVK+LCGL+ +EKYLE
Sbjct: 1291 SWNCIDDDHRERCDLGFELPVPATMPVVKQLCGLESIEKYLE 1332
>AT5G20960.1 | chr5:7116783-7122338 FORWARD LENGTH=1369
Length = 1368
Score = 317 bits (812), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/280 (56%), Positives = 208/280 (74%), Gaps = 4/280 (1%)
Query: 1 MTAFALGQLW-PKGCEGLLDRIRVLQSDTLNLIQGGLTAGSTTSESSCAATLQACNMLIE 59
M A++LG + + LL +IRV+QSDTL+++QG +TAGSTTSE+S A C+ L+E
Sbjct: 1081 MAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAGSTTSEASSEAVRICCDGLVE 1140
Query: 60 RLKPVMERLQLQSD-TVSWDTLISQASQENINLSASAYWVPEQDSNFYLNYGAGTSEVEV 118
RL PV L Q+ V+WD+LISQA Q++IN+S S+ ++P+ YLNYG SEVEV
Sbjct: 1141 RLLPVKTALVEQTGGPVTWDSLISQAYQQSINMSVSSKYMPDSTGE-YLNYGIAASEVEV 1199
Query: 119 DLLTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGIGFFIYEEHQTNSDGLVISNST 178
++LTG TI+R+D+IYDCGKSLNPAVDLGQIEG+F+QG+GFF+ EE NSDGLV+++ST
Sbjct: 1200 NVLTGETTILRTDIIYDCGKSLNPAVDLGQIEGAFVQGLGFFMLEEFLMNSDGLVVTDST 1259
Query: 179 WDYKIPSVDTIPKQFNAEVLNTGYHKHRVLSSKASGEPAVVLGASVHCAVXXXXXXXXXX 238
W YKIP+VDTIP+QFN E+LN+G HK+RVLSSKASGEP ++L ASVHCAV
Sbjct: 1260 WTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVKEARKQ 1319
Query: 239 -FAGNNGSGSSLLTFQLDVPAPMTVVKELCGLDIVEKYLE 277
+ N+ + + F+L VPA M +VKE CGLD+VEKYLE
Sbjct: 1320 ILSWNSNKQGTDMYFELPVPATMPIVKEFCGLDVVEKYLE 1359
>AT4G34890.1 | chr4:16618736-16624983 REVERSE LENGTH=1362
Length = 1361
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 21/198 (10%)
Query: 48 AATLQACNMLIERLKPVMERLQLQSDTVSWDTLISQASQENINLSASAY---------WV 98
AA L AC +I R++PV + + T L+S + I+LSA + W+
Sbjct: 1117 AAVLDACEQIIARMEPVASKHNFNTFT----ELVSACYFQRIDLSAHGFHIVPDLGFDWI 1172
Query: 99 PEQDSNF-YLNYGAGTSEVEVDLLTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGI 157
+ + F Y YGA +EVE+D LTG +D++ D G SLNPA+D+GQIEG+F+QG+
Sbjct: 1173 SGKGNAFRYYTYGAAFAEVEIDTLTGDFHTRAADIMLDLGYSLNPAIDVGQIEGAFVQGL 1232
Query: 158 GFFIYEE-------HQTNSDGLVISNSTWDYKIPSVDTIPKQFNAEVLNTGYHKHRVLSS 210
G+ EE H+ G +++ +YKIPS++ +P N +L + + SS
Sbjct: 1233 GWVALEELKWGDAAHKWIKPGSLLTCGPGNYKIPSINDMPFNLNVSLLKGNPNTKAIHSS 1292
Query: 211 KASGEPAVVLGASVHCAV 228
KA GEP L +SV A+
Sbjct: 1293 KAVGEPPFFLASSVFFAI 1310
>AT4G34900.1 | chr4:16625688-16631306 REVERSE LENGTH=1354
Length = 1353
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 21/186 (11%)
Query: 48 AATLQACNMLIERLKPVMERLQLQSDTVSWDTLISQASQENINLSASAYW-VPEQDSNF- 105
AA L AC +I R++PV + + + L S + I+LSA + VPE + ++
Sbjct: 1109 AAVLDACEQIIARMEPVASKHNFNT----FSELASACYFQRIDLSAHGFHIVPELEFDWV 1164
Query: 106 --------YLNYGAGTSEVEVDLLTGAITIIRSDLIYDCGKSLNPAVDLGQIEGSFIQGI 157
Y YGA +EVE+D LTG ++D++ D G SLNP +D+GQIEG+F+QG+
Sbjct: 1165 SGKGNAYRYYTYGAAFAEVEIDTLTGDFHTRKADIMLDLGYSLNPTIDIGQIEGAFVQGL 1224
Query: 158 GFFIYEE-------HQTNSDGLVISNSTWDYKIPSVDTIPKQFNAEVLNTGYHKHRVLSS 210
G+ EE H+ G +++ YKIPS++ +P Q N +L + + SS
Sbjct: 1225 GWVALEELKWGDAAHKWIKPGSLLTCGPGSYKIPSINDMPFQLNVSLLKGNPNAKAIHSS 1284
Query: 211 KASGEP 216
KA GEP
Sbjct: 1285 KAVGEP 1290
>AT1G02590.1 | chr1:552138-552761 REVERSE LENGTH=90
Length = 89
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 40/50 (80%)
Query: 99 PEQDSNFYLNYGAGTSEVEVDLLTGAITIIRSDLIYDCGKSLNPAVDLGQ 148
PE S YLNYG G SEVEVDL+TG IRSD+IYDCGKSLNPA+DLGQ
Sbjct: 26 PESSSAEYLNYGIGASEVEVDLVTGKTEFIRSDIIYDCGKSLNPAIDLGQ 75
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,816,791
Number of extensions: 225906
Number of successful extensions: 613
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 602
Number of HSP's successfully gapped: 7
Length of query: 288
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 190
Effective length of database: 8,419,801
Effective search space: 1599762190
Effective search space used: 1599762190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)