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Os07g0273900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.22 (0.0245) R2 : 0.839
β1 : 1.4 (0.0899) R2dD : 0.0812 R2D : 0.0313
β2 : 2.38 (0.066) R2dC : 0.55 R2C : 0.686
β3 : -0.982 (0.0771) R2dE : 0.0657 R2E : 0.2
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.465 (0.0524) R2dN8 : 0.0428 R2N8 : 0.00193
σ : 0.458
deviance : 96.58
__
_____
C
peak time of C : 14.6
E
wheather : atmosphere
threshold : 1006
memory length : 62
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.03
open length of G : 3.55

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.3 0.444 9.21 1.45 2.38 -1.05 -0.73 1.49 0.51 14.7 1006 60 3.02 3.44
92.87 0.449 9.23 1.44 2.39 -1.01 -0.951 -- 0.48 14.7 1006 63 3 3.45
91 0.444 9.21 1.44 2.38 -1.05 -- 1.79 0.507 14.7 1006 59 3 3.48
96.58 0.458 9.22 1.4 2.38 -0.982 -- -- 0.465 14.6 1006 62 3.03 3.55
345.18 0.865 9.18 1.64 -- -1.94 -- 2.41 0.685 -- 1004 67 2.22 4.48
120.09 0.514 9.24 1.27 2.77 -- -0.755 -- 0.451 15.1 -- -- -- --
121.97 0.517 9.24 1.25 2.77 -- -- -- 0.446 15.1 -- -- -- --
297.26 0.807 9.18 1.27 -- -1.73 -- -- 0.658 -- 995.5 111 0.517 6.75
144.57 0.56 9.22 -- 2.34 -0.925 -- -- 0.46 14.6 1006 63 3.05 3.63
559.84 1.11 9.25 1.14 -- -- -- -- 0.374 -- -- -- -- --
163.44 0.598 9.27 -- 2.75 -- -- -- 0.307 15.1 -- -- -- --
328.9 0.845 9.23 -- -- -1.7 -- -- 0.473 -- 992.4 96 0.0161 7.05
593.9 1.14 9.27 -- -- -- -- -- 0.248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 95.01 atmosphere 1005.0 90 > th dose independent rect. 3 3
2 95.59 atmosphere 1005.0 270 > th dose independent rect. 1 4
3 95.60 atmosphere 1000.0 90 > th dose dependent rect. 3 3
6 96.17 atmosphere 1005.0 270 > th dose independent rect. 3 1
9 97.10 radiation 40.0 270 < th dose dependent rect. 15 14
11 97.40 atmosphere 1005.0 10 > th dose independent rect. 3 4
13 97.64 wind 1.0 270 > th dose independent rect. 3 1
17 97.91 wind 5.0 90 < th dose dependent rect. 3 4
21 98.25 temperature 20.0 10 > th dose independent rect. 22 6
22 98.27 atmosphere 1000.0 270 > th dose dependent rect. 1 4
23 98.31 wind 3.0 90 < th dose independent rect. 3 4
24 98.44 atmosphere 1000.0 10 > th dose dependent rect. 3 4
29 98.52 radiation 20.0 270 < th dose independent rect. 15 14
31 98.58 temperature 20.0 90 > th dose independent rect. 22 5
35 98.71 atmosphere 1000.0 270 > th dose dependent rect. 3 1
38 98.91 temperature 10.0 90 > th dose dependent rect. 22 5
41 99.06 wind 3.0 10 < th dose independent rect. 3 4
49 99.25 wind 3.0 10 < th dose dependent rect. 4 3
50 99.34 radiation 20.0 90 < th dose dependent rect. 3 6
65 99.72 radiation 30.0 90 < th dose dependent rect. 3 4
74 99.90 temperature 10.0 10 > th dose dependent rect. 22 5
78 100.00 wind 5.0 270 < th dose independent rect. 3 1
80 100.01 radiation 1.0 270 < th dose independent rect. 1 19
81 100.01 temperature 10.0 270 > th dose dependent rect. 22 2
87 100.14 precipitation 0.1 90 < th dose independent rect. 3 4
88 100.14 precipitation 0.1 90 < th dose dependent rect. 3 4
89 100.14 radiation 1.0 270 < th dose dependent rect. 1 19
90 100.17 temperature 20.0 270 > th dose independent rect. 22 2
92 100.22 temperature 15.0 90 > th dose independent rect. 3 18
93 100.23 humidity 80.0 90 > th dose independent rect. 3 4
100 100.31 radiation 30.0 90 < th dose independent rect. 3 4
102 100.32 temperature 10.0 90 > th dose independent rect. 3 4
104 100.32 temperature 30.0 90 < th dose independent rect. 3 4
105 100.32 humidity 50.0 90 > th dose independent rect. 3 4
107 100.32 atmosphere 995.0 90 > th dose independent rect. 3 4
108 100.32 atmosphere 1015.0 90 < th dose independent rect. 3 4
110 100.32 temperature 10.0 90 > th dose independent rect. 7 20
112 100.35 humidity 50.0 270 > th dose independent rect. 15 14
114 100.36 precipitation 0.1 90 < th dose independent rect. 7 20
115 100.36 precipitation 0.1 90 < th dose dependent rect. 7 20
120 100.44 humidity 50.0 90 > th dose dependent rect. 3 4
127 100.54 wind 9.0 90 < th dose dependent rect. 3 18
128 100.56 radiation 1.0 270 < th dose independent rect. 24 21
136 100.65 humidity 80.0 90 > th dose independent rect. 3 6
153 100.82 radiation 1.0 90 < th dose independent rect. 3 19
170 100.84 radiation 10.0 4320 < th dose dependent rect. 23 5
176 100.97 wind 1.0 270 > th dose independent rect. 22 1
178 101.00 wind 9.0 90 < th dose independent rect. 7 20
179 101.00 temperature 10.0 90 > th dose dependent rect. 3 3
182 101.03 radiation 1.0 90 < th dose dependent rect. 3 19
184 101.04 humidity 50.0 90 > th dose dependent rect. 21 6
232 101.24 wind 3.0 90 < th dose independent rect. 3 8
237 101.27 radiation 1.0 270 < th dose independent rect. 2 3
241 101.28 wind 9.0 90 < th dose independent rect. 3 18
244 101.30 atmosphere 1015.0 90 < th dose independent rect. 7 20
248 101.33 temperature 10.0 90 > th dose independent rect. 21 6
249 101.33 temperature 30.0 90 < th dose independent rect. 21 6
250 101.33 humidity 50.0 90 > th dose independent rect. 21 6
253 101.33 atmosphere 995.0 90 > th dose independent rect. 21 6
254 101.33 radiation 1.0 90 < th dose independent rect. 21 6
260 101.33 atmosphere 1015.0 90 < th dose independent rect. 3 18
262 101.33 radiation 1.0 90 < th dose dependent rect. 21 6
272 101.38 precipitation 0.1 90 < th dose independent rect. 21 6
274 101.38 precipitation 0.1 90 < th dose dependent rect. 21 6
275 101.40 wind 9.0 90 < th dose independent rect. 21 6
292 101.42 precipitation 0.1 10 < th dose independent rect. 3 19
299 101.42 precipitation 0.1 10 < th dose dependent rect. 3 19
300 101.43 humidity 50.0 270 > th dose independent rect. 1 19
311 101.51 temperature 10.0 1440 > th dose independent rect. 23 5
314 101.51 temperature 30.0 1440 < th dose independent rect. 23 5
318 101.51 humidity 50.0 1440 > th dose independent rect. 23 5
327 101.51 atmosphere 995.0 1440 > th dose independent rect. 23 5
328 101.51 radiation 1.0 1440 < th dose independent rect. 23 5
348 101.51 temperature 10.0 1440 > th dose independent rect. 4 19
359 101.54 humidity 50.0 90 > th dose dependent rect. 3 18
360 101.56 precipitation 0.1 10 < th dose independent rect. 22 5
362 101.56 precipitation 0.1 10 < th dose dependent rect. 22 5
366 101.58 humidity 50.0 270 > th dose independent rect. 24 21
372 101.61 wind 5.0 90 < th dose dependent rect. 3 8
373 101.62 wind 9.0 10 < th dose independent rect. 22 5
374 101.62 temperature 10.0 10 > th dose independent rect. 22 5
376 101.62 temperature 30.0 10 < th dose independent rect. 22 5
378 101.62 humidity 50.0 10 > th dose independent rect. 22 5
384 101.62 atmosphere 995.0 10 > th dose independent rect. 22 5
386 101.62 radiation 1.0 10 < th dose independent rect. 22 5
397 101.62 temperature 10.0 10 > th dose independent rect. 3 19
401 101.62 atmosphere 1015.0 10 < th dose independent rect. 3 19
403 101.62 radiation 1.0 10 < th dose dependent rect. 22 5
414 101.63 radiation 10.0 90 < th dose independent rect. 3 6
415 101.65 radiation 20.0 10 < th dose dependent rect. 4 4
418 101.67 humidity 50.0 10 > th dose dependent rect. 22 5
425 101.71 wind 1.0 270 > th dose independent rect. 5 20
428 101.73 humidity 70.0 90 > th dose dependent rect. 3 6
430 101.75 atmosphere 1015.0 90 < th dose independent rect. 22 5
441 101.79 atmosphere 995.0 90 > th dose independent rect. 3 18
460 101.89 radiation 40.0 43200 < th dose dependent rect. 23 5
478 101.91 temperature 10.0 270 > th dose independent rect. 3 1
480 101.91 temperature 30.0 270 < th dose independent rect. 3 1
481 101.91 humidity 50.0 270 > th dose independent rect. 3 1
484 101.91 atmosphere 995.0 270 > th dose independent rect. 3 1
485 101.91 atmosphere 1010.0 270 < th dose independent rect. 3 1
487 101.91 radiation 1.0 270 < th dose independent rect. 3 1
494 101.91 temperature 10.0 270 > th dose independent rect. 4 23
495 101.91 radiation 1.0 270 < th dose dependent rect. 3 1
510 101.94 wind 3.0 90 < th dose independent rect. 3 18
524 101.98 temperature 10.0 270 > th dose dependent rect. 3 1
543 102.07 atmosphere 995.0 90 > th dose independent rect. 7 20
550 102.11 precipitation 0.1 270 < th dose independent rect. 3 1
551 102.11 precipitation 0.1 270 < th dose dependent rect. 3 1
554 102.13 precipitation 0.1 10 < th dose independent rect. 3 4
556 102.13 precipitation 0.1 10 < th dose dependent rect. 3 4
574 102.22 wind 9.0 90 < th dose dependent rect. 3 12
576 102.23 radiation 10.0 10 < th dose dependent rect. 4 18
580 102.25 temperature 30.0 90 < th dose independent rect. 3 18
597 102.32 wind 9.0 1440 < th dose independent rect. 4 4
598 102.32 temperature 10.0 1440 > th dose independent rect. 4 4
601 102.32 temperature 30.0 1440 < th dose independent rect. 4 4
605 102.32 humidity 50.0 1440 > th dose independent rect. 4 4
610 102.32 atmosphere 995.0 1440 > th dose independent rect. 4 4
611 102.32 atmosphere 1015.0 1440 < th dose independent rect. 4 4
612 102.32 temperature 10.0 1440 > th dose independent rect. 8 20
645 102.42 temperature 10.0 10 > th dose independent rect. 3 4
647 102.42 temperature 30.0 10 < th dose independent rect. 3 4
648 102.42 humidity 50.0 10 > th dose independent rect. 3 4
651 102.42 atmosphere 995.0 10 > th dose independent rect. 3 4
652 102.42 atmosphere 1015.0 10 < th dose independent rect. 3 4
653 102.42 radiation 20.0 10 < th dose independent rect. 3 4
657 102.42 temperature 15.0 270 > th dose independent rect. 1 20
658 102.42 temperature 10.0 10 > th dose independent rect. 7 20
694 102.53 wind 9.0 90 < th dose dependent rect. 3 14
695 102.54 precipitation 0.1 270 < th dose independent rect. 5 11
697 102.54 precipitation 0.1 270 < th dose dependent rect. 5 11
711 102.64 wind 9.0 270 < th dose independent rect. 16 13
712 102.65 wind 1.0 270 > th dose independent rect. 21 4
735 102.72 temperature 10.0 270 > th dose independent rect. 5 11
736 102.72 atmosphere 1015.0 270 < th dose independent rect. 5 11
737 102.72 temperature 10.0 270 > th dose independent rect. 16 13
749 102.76 radiation 1.0 270 < th dose independent rect. 1 7
752 102.77 wind 9.0 30 < th dose dependent rect. 22 5
771 102.85 temperature 10.0 270 > th dose independent rect. 22 2
772 102.85 temperature 30.0 270 < th dose independent rect. 22 2
773 102.85 humidity 50.0 270 > th dose independent rect. 22 2
776 102.85 atmosphere 995.0 270 > th dose independent rect. 22 2
777 102.85 radiation 1.0 270 < th dose independent rect. 22 2
787 102.85 radiation 1.0 270 < th dose dependent rect. 22 2
805 102.90 wind 9.0 270 < th dose independent rect. 22 2
807 102.90 wind 1.0 90 > th dose independent rect. 7 20
812 102.91 humidity 50.0 270 > th dose dependent rect. 3 1
814 102.92 wind 5.0 90 < th dose dependent rect. 3 10
826 102.95 humidity 50.0 270 > th dose dependent rect. 22 2
865 102.98 humidity 50.0 90 > th dose independent rect. 3 18
872 103.00 precipitation 0.1 270 < th dose independent rect. 22 2
875 103.00 precipitation 0.1 270 < th dose dependent rect. 22 2
903 103.03 wind 9.0 270 < th dose independent rect. 24 22
907 103.04 precipitation 0.1 270 < th dose independent rect. 24 22
909 103.04 precipitation 0.1 270 < th dose dependent rect. 24 22
913 103.05 temperature 10.0 10 > th dose dependent rect. 4 3
925 103.09 humidity 80.0 90 > th dose dependent rect. 3 18
941 103.11 atmosphere 1015.0 270 < th dose independent rect. 22 2
956 103.14 wind 9.0 10 < th dose independent rect. 7 20