Os07g0264800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os07g0264800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.25 | 0.231 | 11.4 | -0.714 | 0.394 | -0.373 | 0.0692 | 0.684 | -0.49 | 6.67 | 90.89 | 28 | -- | -- |
| 25.18 | 0.234 | 11.4 | -0.702 | 0.403 | -0.353 | 0.229 | -- | -0.481 | 6.61 | 91.37 | 27 | -- | -- |
| 24.18 | 0.229 | 11.4 | -0.7 | 0.394 | -0.399 | -- | 0.813 | -0.485 | 6.69 | 91.87 | 27 | -- | -- |
| 25.3 | 0.234 | 11.4 | -0.7 | 0.397 | -0.33 | -- | -- | -0.479 | 6.71 | 91.19 | 25 | -- | -- |
| 30.19 | 0.256 | 11.4 | -0.718 | -- | -0.431 | -- | 1.81 | -0.435 | -- | 94.59 | 13 | -- | -- |
| 27.8 | 0.247 | 11.4 | -0.737 | 0.312 | -- | 0.00264 | -- | -0.423 | 7.96 | -- | -- | -- | -- |
| 27.8 | 0.247 | 11.4 | -0.737 | 0.312 | -- | -- | -- | -0.423 | 7.96 | -- | -- | -- | -- |
| 31.97 | 0.263 | 11.4 | -0.738 | -- | -0.589 | -- | -- | -0.428 | -- | 95.91 | 24 | -- | -- |
| 38 | 0.287 | 11.4 | -- | 0.422 | -0.399 | -- | -- | -0.422 | 6.35 | 89.51 | 27 | -- | -- |
| 33.12 | 0.269 | 11.4 | -0.734 | -- | -- | -- | -- | -0.419 | -- | -- | -- | -- | -- |
| 42.12 | 0.304 | 11.4 | -- | 0.308 | -- | -- | -- | -0.341 | 8.13 | -- | -- | -- | -- |
| 45.55 | 0.314 | 11.4 | -- | -- | -0.219 | -- | -- | -0.377 | -- | 90.4 | 5 | -- | -- |
| 47.33 | 0.321 | 11.4 | -- | -- | -- | -- | -- | -0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.81 | wind | 1 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 23.06 | wind | 1 | 270 | < th | dose independent | rect. | 24 | 1 |
| 5 | 23.51 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 8 | 23.54 | humidity | 90 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 13 | 23.72 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 14 | 23.75 | humidity | 90 | 30 | > th | dose dependent | sin | 9 | NA |
| 17 | 23.79 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 41 | 23.94 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 10 |
| 43 | 23.95 | humidity | 90 | 30 | > th | dose dependent | rect. | 21 | 9 |
| 45 | 23.95 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 73 | 24.02 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 88 | 24.04 | humidity | 90 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 109 | 24.07 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 3 |
| 145 | 24.10 | humidity | 90 | 270 | > th | dose independent | rect. | 21 | 7 |
| 250 | 24.21 | humidity | 90 | 30 | > th | dose dependent | rect. | 13 | 17 |
| 273 | 24.25 | humidity | 90 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 300 | 24.30 | humidity | 90 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 391 | 24.37 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 23 | 2 |
| 392 | 24.37 | humidity | 90 | 30 | > th | dose dependent | no | NA | NA |
| 450 | 24.39 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 1 |
| 470 | 24.39 | humidity | 90 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 479 | 24.40 | humidity | 90 | 90 | < th | dose independent | rect. | 17 | 15 |
| 490 | 24.41 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 528 | 24.49 | humidity | 90 | 30 | > th | dose independent | rect. | 21 | 9 |
| 531 | 24.49 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 534 | 24.50 | humidity | 90 | 30 | > th | dose independent | sin | 8 | NA |
| 563 | 24.54 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 22 | 4 |
| 565 | 24.55 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 8 | 20 |
| 577 | 24.57 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 5 |
| 600 | 24.60 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 4 |
| 610 | 24.61 | humidity | 90 | 270 | > th | dose dependent | sin | 14 | NA |
| 648 | 24.66 | wind | 1 | 270 | < th | dose independent | rect. | 9 | 17 |
| 662 | 24.67 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 11 | 18 |
| 663 | 24.67 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 714 | 24.73 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 755 | 24.78 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 8 |
| 765 | 24.79 | humidity | 90 | 30 | > th | dose independent | rect. | 24 | 10 |
| 791 | 24.82 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 801 | 24.83 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 1 | 1 |
| 854 | 24.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 858 | 24.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 862 | 24.87 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 9 |
| 871 | 24.88 | radiation | 1 | 30 | < th | dose independent | rect. | 1 | 15 |
| 937 | 24.93 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 956 | 24.95 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 20 | 1 |
| 962 | 24.95 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 16 |