Os07g0259700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PRLI-interacting factor G (Fragment).
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Os07g0259700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PRLI-interacting factor G (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.26 | 0.291 | 11.5 | 0.735 | 0.736 | -1.36 | 0.232 | 0.766 | 0.0727 | 20.1 | 29.74 | 14 | -- | -- |
| 38.82 | 0.29 | 11.5 | 0.87 | 0.726 | -1.35 | 0.335 | -- | 0.0855 | 20 | 28.52 | 19 | -- | -- |
| 38.37 | 0.288 | 11.5 | 0.712 | 0.726 | -1.38 | -- | 0.891 | 0.0754 | 20 | 30.36 | 18 | -- | -- |
| 39.12 | 0.291 | 11.5 | 0.856 | 0.736 | -1.34 | -- | -- | 0.0943 | 19.9 | 28.45 | 18 | -- | -- |
| 49.12 | 0.326 | 11.5 | 0.61 | -- | -1.94 | -- | 0.945 | 0.0528 | -- | 40.41 | 356 | -- | -- |
| 64.19 | 0.376 | 11.4 | 1.18 | 0.883 | -- | -0.0296 | -- | 0.378 | 18 | -- | -- | -- | -- |
| 64.19 | 0.375 | 11.4 | 1.18 | 0.883 | -- | -- | -- | 0.378 | 18 | -- | -- | -- | -- |
| 49.72 | 0.328 | 11.5 | 0.76 | -- | -1.91 | -- | -- | 0.0932 | -- | 49.1 | 367 | -- | -- |
| 55.81 | 0.348 | 11.5 | -- | 0.64 | -1.71 | -- | -- | -0.0751 | 20.4 | 27.97 | 100 | -- | -- |
| 104.6 | 0.478 | 11.4 | 1.16 | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
| 101.13 | 0.47 | 11.5 | -- | 0.865 | -- | -- | -- | 0.246 | 18 | -- | -- | -- | -- |
| 63.84 | 0.372 | 11.5 | -- | -- | -2.17 | -- | -- | -0.0216 | -- | 44.07 | 378 | -- | -- |
| 139.97 | 0.552 | 11.4 | -- | -- | -- | -- | -- | 0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 3 | 38.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 4 | 38.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 6 | 38.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 38.31 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 10 | 38.32 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 15 | 38.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 16 | 38.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 17 | 38.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 20 | 38.76 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 24 | 38.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 26 | 38.93 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 33 | 39.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 49 | 39.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 56 | 39.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 57 | 39.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 76 | 39.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 79 | 39.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 81 | 39.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 87 | 40.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 111 | 40.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 112 | 40.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 126 | 40.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 143 | 40.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 144 | 40.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 281 | 41.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 284 | 41.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 344 | 41.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 364 | 41.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 721 | 42.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 740 | 42.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 851 | 42.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 889 | 42.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 890 | 42.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |