BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0259700 Os07g0259700|AK067947
(564 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545 326 2e-89
AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549 218 6e-57
AT5G60050.1 | chr5:24183680-24185264 REVERSE LENGTH=500 218 1e-56
AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521 189 3e-48
AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442 62 8e-10
AT3G19920.1 | chr3:6929840-6931771 REVERSE LENGTH=417 54 2e-07
>AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545
Length = 544
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 234/346 (67%), Gaps = 10/346 (2%)
Query: 216 IEVDGVDNVEAFRAAVELMYQPDP--LRWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSY 273
IEV V+N+ FR VELM++ ++ GV R+IDVLEV++ I F R V CL Y
Sbjct: 198 IEVCDVENLGVFRETVELMFEESNVIIKKFMTMGVYRAIDVLEVAAGIKFSRAVLSCLKY 257
Query: 274 IEAVPWXXXXXXXXXXXFARCTFDEAISQDVLARLRPHSWSSSED-LTVHLIQSVTSSTN 332
+EAVPW +FD+ ++LAR + + +D L+ L+ S+TS ++
Sbjct: 258 LEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFNSNETENLQDSLSKKLVWSITSCSD 317
Query: 333 SGARKDMQSLVNGLLSKSSVYQKDMAGLNRESLYNICYACLNSLVDLYDEATEATNHTAQ 392
R +++SLV GLL KSSVY+K+ +N+E +Y C++SL L++E + +++ +
Sbjct: 318 VNPRNELKSLVKGLLCKSSVYEKEQPEINKEDIYRAGKCCVDSLAKLFEEGSSSSSSKKE 377
Query: 393 ALVIKGSKPFIERISQQTENLNWLLDILVNIDMAEEFVELWAKQDRLIRIHEQASPMMRY 452
P IE IS++ EN+NWLL+I+++ ++AEEFVE+W KQ RL+ +HE+ SPM+RY
Sbjct: 378 K-------PLIESISREVENINWLLEIMIDREIAEEFVEIWGKQRRLVEMHERVSPMVRY 430
Query: 453 ELSRISASVFIALGKGKVQCRGELRSLLFYGWFSPMLLDFGWLQRCSKGLDVRSLEENLG 512
E+SR++ ++FIA+GK +VQC GE R+ L WF PML+DFGWLQRC KGLD+R +EE +G
Sbjct: 431 EVSRVTGAIFIAMGKRRVQCGGEARAGLVEAWFKPMLVDFGWLQRCKKGLDMREVEEGMG 490
Query: 513 QALLTLPLKQQQCLFEEWFQCFASKGSECPNLTRAFQVWWRRSFVR 558
Q LLTLP+K+Q +F EWF+ F+ G+ECPNL++AFQ+WWRRSF+R
Sbjct: 491 QTLLTLPVKEQYQVFMEWFRWFSKHGTECPNLSKAFQIWWRRSFLR 536
>AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549
Length = 548
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 196/357 (54%), Gaps = 24/357 (6%)
Query: 216 IEVDGVDNVEAFRAAVELMYQPDPLRWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSYIE 275
+E+ D+VE + + LMY D + + VSR + +L+VS++I F+ GV CL Y+E
Sbjct: 193 VEISDCDDVEVYIETLMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAGVLSCLEYLE 252
Query: 276 AVPWXXXXXXXXXXXFARCTFDEAISQDVLARLRPHSWSSS--------EDLTVHLIQSV 327
A PW + + + +VL R+ + + + +++ ++L+ V
Sbjct: 253 AAPWSEDEEYRIASLLSELHLENVGATEVLRRVSVEASNGNNGSNGGSNDEVLLNLLHIV 312
Query: 328 TSSTNSGARKDMQSLVNGLLSKSSVYQKDMAGLNRESLYNICYACLNSLVDLYDEATEAT 387
+ AR+DM++LV+ +L ++S L +ESLY C CL+ L + +A E+
Sbjct: 313 LEGKDEKARRDMKTLVSKMLRENSSGND----LRKESLYLACDGCLHKLKRQFLQAAESD 368
Query: 388 NHTAQALVIKGSKPFIERISQQTENLNWLLDILVNIDMAEEFVELWAKQDRLIRIHEQAS 447
+++I++Q +NL+W+LDIL++ +AE+F+ +WA L +H +
Sbjct: 369 LEN------------VDQIARQADNLHWILDILIDRQIAEDFIVMWASLSELSEVHSKVP 416
Query: 448 PMMRYELSRISASVFIALGKGKVQCRGELRSLLFYGWFSPMLLDFGWLQRCSKGLDVRSL 507
+ R+E+SR++A +F+ +GKG++ E+R LL W +P DFGW++R SKGLD +
Sbjct: 417 VVHRFEISRVTARIFVGIGKGQILTPKEVRCLLLRNWLTPFYDDFGWMRRASKGLDRYLI 476
Query: 508 EENLGQALLTLPLKQQQCLFEEWFQCFASKGSECPNLTRAFQVWWRRSFVRSSVEGQ 564
E+ L +LTLPL QQ F WF F + +CPN+ R F+VWWRR+F R + Q
Sbjct: 477 EDGLSNTILTLPLAWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWRRAFWRRKEQSQ 533
>AT5G60050.1 | chr5:24183680-24185264 REVERSE LENGTH=500
Length = 499
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 200/385 (51%), Gaps = 20/385 (5%)
Query: 180 VVMELDSGVLCDSSAFFXXXXXXXXXXXXXXXXXXXIEVDGVDNVEAFRAAVELMYQPDP 239
V M++ VL + S FF +E+ D++E + V LMY D
Sbjct: 113 VTMDVHRKVLSEKSRFFMEKMNSRREKGVSHM----VEISECDDLEIYVETVVLMYSDDL 168
Query: 240 LRWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSYIEAVPWXXXXXXXXXXXFARCTFDEA 299
+ L V + + +L+VS++I F+ GV CL ++EAVPW +
Sbjct: 169 KKKLIGENVIKILALLKVSAAISFDEGVMSCLEHLEAVPWSEDEEETVVTCLEELHLPDD 228
Query: 300 ISQDVLARLRPHSWSSS-----EDLTVHLIQSVTSSTNSGARKDMQSLVNGLLSKSSVYQ 354
+L R+ +SS +D+ L+ V + + AR++M+ L+ L+ + + Y
Sbjct: 229 SVTLILQRVSSQPSTSSTRTRTDDIFSKLLTGVLQAKDDKARREMKVLIFKLVREEADYD 288
Query: 355 KDMAGLNRESLYNICYACLNSLVDLYDEATEATNHTAQALVIKGSKPFIERISQQTENLN 414
++R++LY +C+ CL SLV E T N K + I+++ +N+
Sbjct: 289 -----VSRDTLYGLCHRCLTSLVLCLSEVTTQMNDPG-----KDRGALMGEIAREADNML 338
Query: 415 WLLDILVNIDMAEEFVELWAKQDRLIRIHEQASPMMRYELSRISASVFIALGKGKVQCRG 474
W++DIL+ + EFV+LWA Q L +H + M R+E+S+I+A + + +GKG++
Sbjct: 339 WMVDILIEKKLCSEFVKLWADQKELANLHSKIPTMYRHEISKITAQICVGIGKGRILVNR 398
Query: 475 ELRSLLFYGWFSPMLLDFGWLQR-CSKGLDVRSLEENLGQALLTLPLKQQQCLFEEWFQC 533
E R + W + DFGW++R S+ LD + +E+ L Q +LTL L+QQQ + +WF
Sbjct: 399 ETRFAVLNTWLEALYDDFGWMRRLSSRSLDRKLVEDGLSQTILTLSLRQQQVILMKWFDR 458
Query: 534 FASKGSECPNLTRAFQVWWRRSFVR 558
F SKG +CPN+ RAF+VWWRR+F+R
Sbjct: 459 FLSKGDDCPNVQRAFEVWWRRAFIR 483
>AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521
Length = 520
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 195/383 (50%), Gaps = 23/383 (6%)
Query: 179 CVVMELDSGVLCDSSAFFXXXXXXXXXXXXXXXXXXXIEVDGVDNVEAFRAAVELMYQPD 238
CV + + VL D S FF +E++ ++ E + + LMY D
Sbjct: 138 CVKLSVHKKVLVDHSCFFAKKLAEKDSVFAC------LEIESCEDAELYVETIGLMYCKD 191
Query: 239 PLRWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSYIEAVPWX-XXXXXXXXXXFARCTFD 297
+ L VSR + VL+V+ + F ++ CL Y+EAVPW R +
Sbjct: 192 MKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEAVPWVGEEEEEKVISSILRLKTE 251
Query: 298 EAISQDVLARLRPHSWSSSEDLTVHLIQSVTSSTNSGARKDMQSLVNGLLSKSSVYQKDM 357
VL R+ ++ ++ +I+ V S +R++M+S+V LL + + ++
Sbjct: 252 GVGVTPVLKRVASNAVDPPKETLSRIIELVLRSKEEKSRREMKSIVLKLLREQN--GANV 309
Query: 358 AGLNRESLYNICYACLNSLVDLYDEATEATNHTAQALVIKGSKPFIE--RISQQTENLNW 415
A +++Y+ C CL+S++ L+ +A+E G KP + +I+ + +NL W
Sbjct: 310 ADNFNDTIYSSCQTCLDSVLSLFKQASE------------GEKPETDTKQIAVEADNLTW 357
Query: 416 LLDILVNIDMAEEFVELWAKQDRLIRIHEQASPMMRYELSRISASVFIALGKGKVQCRGE 475
LLD+L AEEF WA Q L +HE+ M RY +SR+++ +FI +G+G++ +
Sbjct: 358 LLDVLAERQAAEEFSVTWANQKELALLHEKLPLMSRYHISRVTSRLFIGIGRGELLPSKD 417
Query: 476 LRSLLFYGWFSPMLLDFGWLQRCSKGLDVRSLEENLGQALLTLPLKQQQCLFEEWFQCFA 535
R LL W P+ D+ WLQ + D + +EE +G+ +LTLPL+ QQ + W F
Sbjct: 418 TRLLLLTTWLQPLFNDYNWLQHGCRSFDGKLVEEGIGRTILTLPLEDQQSILLSWLGSFL 477
Query: 536 SKGSECPNLTRAFQVWWRRSFVR 558
+ G CPNL RAF+VWWRRSF+R
Sbjct: 478 NGGDGCPNLQRAFEVWWRRSFIR 500
>AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442
Length = 441
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 50/341 (14%)
Query: 247 GVSRSIDVLEVSSSIMFERGVKLCLSYIEAVPWXXXXXXXXXXXFARCTFDEAISQDVLA 306
V ++ +L V+ + + V C++Y+EAVPW R + ++ +LA
Sbjct: 104 NVKSALGILSVAKELSCPQIVTACVNYLEAVPWEEGEEEEILRIVPRIGSE---AEPILA 160
Query: 307 RLRPHSWSSSEDLTVHLIQSVTSS-------TNSGARKDMQSLVNGLLSKSSVYQKDMAG 359
RL+P S+ ++ V + TSS S A++ ++ ++ + D A
Sbjct: 161 RLQPVDQSAVLEIFVSAFRFATSSPPLLLGDIKSSAQEQIEYMIT---------EDDDAP 211
Query: 360 L--NRESLYNICYACLNSL-VDLYDEATEATNHTAQALVIKGSKPFIERISQQTENLNWL 416
L E + C+ SL V + E T ++ VI F +S ++ W+
Sbjct: 212 LLIADEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINKKGSFRMVLS----DMCWV 267
Query: 417 LDILVNIDMAEEFVELWAK-QDRLIRIHEQASPM------MRYELSRISASVFIALGKGK 469
IL +++ +FV WA ++L+++ EQ +R ++ ++A V A+G G
Sbjct: 268 FQILTKMEVVRDFVITWADISEKLVKVVEQLETTVVEAVEIRVKVIEVTAKVIEAIGYGT 327
Query: 470 VQCRGELRSLLFYGWF-----------SPMLLD--FGWLQRCSKGLDVRSLEENLGQALL 516
V R + W SP+ D ++ G ++LE + +L
Sbjct: 328 VILPTAKRLQMVKLWLPFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESSFVSIIL 387
Query: 517 TLPLKQQQCLFEEWFQCFASKGSECPNLTRAFQVWWRRSFV 557
LP Q + EW SK P+LT AF+VW RS V
Sbjct: 388 ALPSADQAEILTEWL----SKNGLYPDLTEAFEVWCYRSKV 424
>AT3G19920.1 | chr3:6929840-6931771 REVERSE LENGTH=417
Length = 416
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 17/193 (8%)
Query: 371 ACLN---SLVDLYDEATEATNHTAQALVIKGSKPFIER---ISQQTENLNWLLDILVNID 424
AC+N SL D+ T A+V G E + + E L W+ + L
Sbjct: 220 ACINTVRSLADMTGNLLSQTRRRESAVVRAGGIQENEAELAVEKLAEELLWMTEKLRRYG 279
Query: 425 MAEEFVELWAKQDRLIRIHEQASPMMRYELSRISASVFIALGKGKVQCRGELRSLLFYGW 484
E ++ W+ L + A+P ++ + +ISA + L + Q G++ L W
Sbjct: 280 AVAEGIKRWSYASGLASLSLTAAPRVQGLMVKISALLIGELARDSTQVPGQVTFRLLANW 339
Query: 485 FSPML------LDFGWLQRCSKGLDVRSLEENLGQALLTLPLKQQQCLFEEWFQCFASKG 538
P+ L F L G + +E + +A+ TLP Q+ L W Q F+
Sbjct: 340 L-PLFSHARNGLAFPVL----TGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSVSA 394
Query: 539 SECPNLTRAFQVW 551
SE PNL A+ W
Sbjct: 395 SEWPNLQPAYDRW 407
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,240,137
Number of extensions: 271980
Number of successful extensions: 720
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 707
Number of HSP's successfully gapped: 6
Length of query: 564
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 460
Effective length of database: 8,255,305
Effective search space: 3797440300
Effective search space used: 3797440300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)