Os07g0249200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein).
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Os07g0249200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.59 | 0.4 | 8.88 | -0.718 | 2.7 | 2.07 | -0.0846 | -3.46 | -0.358 | 20.6 | 10.35 | 126 | -- | -- |
| 81.65 | 0.421 | 8.81 | -0.224 | 2.68 | 2.01 | 0.0943 | -- | -0.223 | 20.6 | 9.238 | 132 | -- | -- |
| 72.61 | 0.397 | 8.88 | -0.713 | 2.7 | 2.07 | -- | -3.45 | -0.357 | 20.6 | 10.39 | 126 | -- | -- |
| 81.67 | 0.421 | 8.82 | -0.224 | 2.68 | 2.01 | -- | -- | -0.223 | 20.6 | 10.05 | 133 | -- | -- |
| 327.1 | 0.842 | 8.86 | -0.817 | -- | 3.3 | -- | -4.23 | -0.556 | -- | 24.08 | 578 | -- | -- |
| 121.43 | 0.517 | 8.76 | 0.189 | 2.87 | -- | -0.0632 | -- | 0.055 | 19.9 | -- | -- | -- | -- |
| 121.44 | 0.516 | 8.76 | 0.191 | 2.87 | -- | -- | -- | 0.0549 | 19.9 | -- | -- | -- | -- |
| 341.6 | 0.861 | 8.74 | -0.435 | -- | 2.97 | -- | -- | -0.272 | -- | 24.1 | 580 | -- | -- |
| 82.85 | 0.424 | 8.81 | -- | 2.69 | 1.9 | -- | -- | -0.185 | 20.6 | 10.73 | 132 | -- | -- |
| 567.96 | 1.11 | 8.68 | 0.158 | -- | -- | -- | -- | 0.0158 | -- | -- | -- | -- | -- |
| 122.41 | 0.518 | 8.76 | -- | 2.87 | -- | -- | -- | 0.0336 | 19.9 | -- | -- | -- | -- |
| 344.87 | 0.865 | 8.74 | -- | -- | 2.75 | -- | -- | -0.234 | -- | 24.1 | 581 | -- | -- |
| 568.62 | 1.11 | 8.69 | -- | -- | -- | -- | -- | -0.00178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 70.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 13 | 70.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 16 | 71.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 23 | 71.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 24 | 71.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 38 | 72.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 53 | 72.94 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 56 | 73.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 63 | 73.13 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 68 | 73.28 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 78 | 73.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 18 |
| 86 | 73.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 116 | 74.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 128 | 74.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 133 | 74.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 144 | 75.12 | temperature | 10 | 30 | > th | dose dependent | sin | 21 | NA |
| 152 | 75.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 261 | 77.32 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 295 | 77.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 333 | 78.36 | temperature | 15 | 10 | > th | dose dependent | rect. | 24 | 18 |
| 336 | 78.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 377 | 79.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 446 | 79.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 468 | 80.13 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 626 | 81.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 791 | 82.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 914 | 83.79 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |