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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0248900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.22 (0.0402) R2 : 0.168
β1 : 1.06 (0.147) R2dD : 0.0994 R2D : 0.0503
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.986 (0.144) R2dE : 0.0906 R2E : 0.0422
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.388 (0.0873) R2dN8 : 0.0505 R2N8 : -0.00768
σ : 0.748
deviance : 257.68
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 70.88
memory length : 2934
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
248.8 0.741 4.24 0.894 0.399 -0.996 0.888 -1.77 0.337 20.4 70 4122 -- --
248.38 0.734 4.24 1.07 0.395 -0.954 0.747 -- 0.358 20.5 70.68 2722 -- --
247.5 0.733 4.25 0.909 0.517 -0.994 -- -0.872 0.326 21.9 70.6 2467 -- --
247.54 0.733 4.22 1.12 0.573 -1.06 -- -- 0.399 21.6 71 2436 -- --
257.08 0.747 4.23 0.966 -- -0.92 -- -0.742 0.358 -- 71 2936 -- --
274.4 0.777 4.26 0.973 0.281 -- 1.51 -- 0.262 18.5 -- -- -- --
277.34 0.78 4.26 0.945 0.351 -- -- -- 0.263 20.9 -- -- -- --
257.68 0.748 4.22 1.06 -- -0.986 -- -- 0.388 -- 70.88 2934 -- --
277.39 0.776 4.24 -- 0.549 -1.18 -- -- 0.359 21.2 72 3747 -- --
284.35 0.788 4.25 0.945 -- -- -- -- 0.261 -- -- -- -- --
300.87 0.811 4.28 -- 0.349 -- -- -- 0.158 21.1 -- -- -- --
286.02 0.788 4.22 -- -- -1.03 -- -- 0.407 -- 73 8638 -- --
307.91 0.819 4.27 -- -- -- -- -- 0.156 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 240.68 humidity 70 1440 > th dose dependent rect. 8 6
3 241.00 humidity 80 720 < th dose independent rect. 11 1
4 241.14 humidity 80 1440 > th dose independent rect. 7 7
6 241.52 humidity 80 1440 < th dose independent rect. 7 7
8 241.54 humidity 70 720 > th dose independent rect. 15 1
10 241.78 humidity 70 1440 > th dose independent rect. 10 2
12 241.95 humidity 70 720 > th dose dependent rect. 8 16
24 242.44 radiation 30 720 < th dose independent rect. 14 10
30 242.63 humidity 60 1440 > th dose dependent rect. 11 1
33 242.69 wind 5 43200 < th dose dependent rect. 1 2
37 242.77 wind 5 43200 < th dose dependent rect. 23 8
38 242.78 wind 9 43200 < th dose dependent rect. 1 1
44 242.86 humidity 80 720 > th dose independent rect. 9 15
52 243.09 humidity 80 720 > th dose independent rect. 7 17
68 243.46 wind 1 43200 > th dose dependent rect. 23 8
85 243.66 wind 5 43200 < th dose dependent rect. 23 5
99 243.87 wind 1 43200 > th dose dependent rect. 24 3
105 244.02 radiation 30 720 < th dose independent rect. 14 1
106 244.03 wind 3 43200 < th dose independent rect. 23 8
125 244.26 wind 3 43200 > th dose independent rect. 23 8
154 244.52 wind 3 43200 < th dose independent rect. 5 1
161 244.56 humidity 80 720 < th dose independent rect. 18 1
170 244.65 wind 1 43200 > th dose dependent rect. 5 1
175 244.69 wind 3 43200 < th dose independent rect. 1 3
180 244.73 humidity 70 1440 > th dose independent rect. 24 12
202 244.87 wind 3 43200 > th dose independent rect. 5 1
214 245.00 wind 3 43200 > th dose independent rect. 1 3
220 245.06 wind 9 43200 < th dose dependent rect. 5 2
256 245.32 humidity 70 720 > th dose dependent sin 21 NA
277 245.50 humidity 80 720 > th dose independent sin 21 NA
301 245.64 wind 1 43200 < th dose dependent rect. 5 1
308 245.72 wind 1 43200 > th dose dependent rect. 23 5
335 245.97 humidity 80 1440 > th dose independent sin 2 NA
348 246.02 humidity 80 720 > th dose independent rect. 9 10
367 246.16 humidity 80 720 < th dose independent rect. 9 10
371 246.19 humidity 80 1440 < th dose independent sin 3 NA
378 246.23 humidity 70 1440 > th dose dependent sin 2 NA
433 246.47 humidity 70 1440 < th dose independent rect. 19 17
439 246.50 humidity 80 30 > th dose dependent rect. 6 20
485 246.72 wind 3 43200 < th dose independent rect. 2 1
498 246.78 humidity 70 1440 > th dose independent sin 6 NA
521 246.85 radiation 30 720 < th dose independent rect. 14 18
554 246.98 humidity 90 1440 < th dose dependent rect. 5 7
599 247.23 radiation 30 720 < th dose independent rect. 14 3
663 247.43 wind 5 43200 < th dose dependent rect. 23 15
681 247.50 wind 3 43200 < th dose independent rect. 23 14
721 247.68 humidity 80 30 > th dose dependent rect. 8 18
729 247.72 radiation 40 720 < th dose dependent rect. 14 10
788 247.94 wind 5 43200 < th dose dependent sin 8 NA
793 247.95 wind 3 43200 > th dose independent rect. 23 14
805 247.99 humidity 70 4320 < th dose independent rect. 18 22
862 248.21 wind 3 43200 < th dose independent sin 7 NA
930 248.38 humidity 70 4320 < th dose independent rect. 15 1
951 248.46 humidity 70 4320 < th dose independent rect. 9 11
979 248.49 wind 3 43200 > th dose independent sin 7 NA
981 248.49 radiation 20 720 < th dose dependent rect. 15 1
986 248.50 humidity 70 4320 < th dose independent rect. 18 20