Os07g0238800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1723 domain containing protein.
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Os07g0238800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1723 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.27 | 0.58 | 5.31 | -6.23 | 0.573 | -0.467 | 0.122 | 4.68 | -1.8 | 13.2 | 4.4 | 1348 | -- | -- |
| 163.65 | 0.596 | 5.41 | -6.08 | 0.544 | -0.992 | 0.389 | -- | -1.9 | 12.9 | 8.03 | 3394 | -- | -- |
| 152.32 | 0.575 | 5.31 | -6.23 | 0.576 | -0.475 | -- | 4.72 | -1.8 | 13.2 | 4.4 | 1339 | -- | -- |
| 163.77 | 0.596 | 5.4 | -6.01 | 0.541 | -1.03 | -- | -- | -1.87 | 12.6 | 9.7 | 3394 | -- | -- |
| 171.72 | 0.61 | 5.32 | -6.31 | -- | -0.124 | -- | 4.58 | -1.77 | -- | 5.821 | 1380 | -- | -- |
| 171.28 | 0.614 | 5.39 | -6.27 | 0.509 | -- | 0.445 | -- | -1.8 | 13.5 | -- | -- | -- | -- |
| 172.07 | 0.614 | 5.39 | -6.26 | 0.509 | -- | -- | -- | -1.79 | 13.4 | -- | -- | -- | -- |
| 179.65 | 0.624 | 5.41 | -6.04 | -- | -1 | -- | -- | -1.88 | -- | 12.31 | 3112 | -- | -- |
| 516.05 | 1.06 | 5.06 | -- | 0.545 | -5.75 | -- | -- | -0.303 | 13.4 | 37.96 | 47084 | -- | -- |
| 187.98 | 0.641 | 5.4 | -6.28 | -- | -- | -- | -- | -1.81 | -- | -- | -- | -- | -- |
| 1204.6 | 1.62 | 5.23 | -- | 0.621 | -- | -- | -- | -1.1 | 13.8 | -- | -- | -- | -- |
| 533.11 | 1.08 | 5.06 | -- | -- | -5.67 | -- | -- | -0.328 | -- | 37.96 | 47520 | -- | -- |
| 1228.02 | 1.64 | 5.24 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.11 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 4 | 140.82 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 5 | 141.02 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 7 | 141.06 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 17 | 141.15 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 23 | 141.17 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 24 | 141.17 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 35 | 141.21 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 58 | 141.26 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 92 | 141.34 | atmosphere | 1000 | 43200 | > th | dose dependent | sin | 9 | NA |
| 104 | 141.35 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 108 | 141.35 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 22 | 17 |
| 109 | 141.35 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 151 | 141.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 217 | 141.43 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 234 | 141.44 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 258 | 141.45 | atmosphere | 1000 | 43200 | > th | dose dependent | no | NA | NA |
| 296 | 141.46 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 4 | 22 |
| 324 | 141.47 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 560 | 141.77 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 561 | 141.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 570 | 141.81 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 602 | 141.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 605 | 141.99 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 613 | 142.06 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 617 | 142.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 628 | 142.21 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 629 | 142.22 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 634 | 142.27 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 636 | 142.31 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 642 | 142.37 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 651 | 142.46 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 654 | 142.47 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 669 | 142.58 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 672 | 142.59 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 673 | 142.59 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 696 | 142.66 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 728 | 142.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 765 | 142.77 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 10 | NA |
| 774 | 142.78 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 828 | 142.84 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 10 | NA |
| 940 | 142.94 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 953 | 142.95 | temperature | 20 | 14400 | < th | dose dependent | sin | 1 | NA |