BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0238800 Os07g0238800|AK106355
(327 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341 144 8e-35
AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668 135 3e-32
AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510 129 3e-30
AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479 125 3e-29
AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697 57 1e-08
AT1G50820.1 | chr1:18833275-18834861 REVERSE LENGTH=529 57 2e-08
AT1G50790.1 | chr1:18824050-18826488 REVERSE LENGTH=813 51 7e-07
AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667 50 2e-06
AT1G50770.1 | chr1:18818559-18820503 REVERSE LENGTH=633 50 2e-06
AT1G50830.1 | chr1:18835559-18837865 REVERSE LENGTH=769 49 3e-06
AT1G50750.1 | chr1:18809184-18812050 REVERSE LENGTH=817 49 5e-06
>AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341
Length = 1340
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 26/317 (8%)
Query: 17 QHKVSKIWDS--PTNCINIRLHRVGI---PYHSL-CQTALENLGFFQIARMKEINNDKYL 70
+H+ + IW+ P + R +G+ P L CQ +E G + + ++ I D L
Sbjct: 26 EHRSAAIWEDEVPPRELTCRHKLLGMRDWPLDPLVCQKLIE-FGLYGVYKVAFIQLDYAL 84
Query: 71 ISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRPITGQADGSWVDMIERLLGI 130
I+ALVERWRP+T+TFHLP GE+T+TLQDV+ L GL + G +TG +W D+ E LLG
Sbjct: 85 ITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGSTKYNWADLCEDLLG- 143
Query: 131 PMEEQHMKQKKRKKEDDMTMVSYSRYSISLSKLRDRFRVMPKNATEREINWYTRALVLDI 190
R D+ +SL+ LR+ FR +P + E + +TRA VL +
Sbjct: 144 ----------HRPGPKDL-----HGSHVSLAWLRENFRNLPADPDEVTLKCHTRAFVLAL 188
Query: 191 IGSMVFTDTSGDGVPAMYLQFMMNLSEQTEYNWGAAALSMLYRQLSIASEKERAEISXXX 250
+ ++ D S V +L + + E + +WG+A L++LYR+L AS++ + I
Sbjct: 189 MSGFLYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPL 248
Query: 251 XXXXXXXXXXXXXGRPVKAMKITKXXXXXXXXXXLDYCLVFGAKWCLSHEFRAPHNAGTE 310
GRP + + D G +W S + G +
Sbjct: 249 VLLQLWAWERLHVGRPGRLKDVGASYMDGIDGPLPD---PLGCRWRASLSHKENPRGGLD 305
Query: 311 YYRSQINLIREGVIVWQ 327
+YR Q + ++ ++WQ
Sbjct: 306 FYRDQFDQQKDEQVIWQ 322
>AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668
Length = 667
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 16/197 (8%)
Query: 50 LENLGFFQIARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHG 109
+E GF + R+ I+ D LISALVERWR +TNTFH VGEMT+TL+D++ L GL I G
Sbjct: 57 VERAGFGFLRRIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDG 116
Query: 110 RPITGQADGSWVDMIERLLGIPMEEQHMKQKKRKKEDDMTMVSYSRYSISLSKLRDRFRV 169
+P+ G + + ER LG S S + LS L+D F
Sbjct: 117 KPVIGLTYTTCSAVCERYLGKSPASN----------------SASGGMVKLSWLKDNFSE 160
Query: 170 MPKNATEREINWYTRALVLDIIGSMVFTDTSGDGVPAMYLQFMMNLSEQTEYNWGAAALS 229
P +A+ E+ TRA +L ++GS +F+ T+G+ VP MYL + + + WGAAAL+
Sbjct: 161 CPDDASFEEVERRTRAYLLYLVGSTIFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALA 220
Query: 230 MLYRQLSIASEKERAEI 246
LYR L AS K ++ I
Sbjct: 221 FLYRALGNASVKSQSTI 237
>AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510
Length = 509
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 52 NLGFFQIARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G+F+ +NN LISALVERWR +TNTFHLP+GEMTITL +V+ + GL I G P
Sbjct: 59 GFGYFRKIGPMSLNNS--LISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDP 116
Query: 112 ITGQADGSWV--DMIERLLGIPMEEQHMKQKKRKKEDDMTMVSYSRYSISLSKLRDRFRV 169
I G G V DM RLLG + K+ V+ SR + L+ L+ F
Sbjct: 117 IVGSKVGDEVAMDMCGRLLG------KLPSAANKE------VNCSR--VKLNWLKRTFSE 162
Query: 170 MPKNATEREINWYTRALVLDIIGSMVFTDTSGDGVPAMYLQFMMNLSEQTEYNWGAAALS 229
P++A+ + +TRA +L +IGS +F T GD V YL + + Y WGAAAL+
Sbjct: 163 CPEDASFDVVKCHTRAYLLYLIGSTIFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALA 222
Query: 230 MLYRQLSIASEKERAEISXXXXXXXXXXXXXXXXGRPVKA 269
LYR L AS K ++ I GRP K+
Sbjct: 223 CLYRALGNASLKSQSNICGCLTLLQCWSYFHLDIGRPEKS 262
>AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479
Length = 478
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 35 LHRVGIPYHSLCQTALENLGFFQIARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTI 94
LH + + G+F++ +NN LISALVERWR +TNTFH P GEMTI
Sbjct: 33 LHHWKLTKEQIALVEKAGFGWFRLVGSISLNNS--LISALVERWRRETNTFHFPCGEMTI 90
Query: 95 TLQDVSCLWGLPIHGRPITG--QADGSWVDMIERLLG-IPMEEQHMKQKKRKKEDDMTMV 151
TL +VS + GL + G+P+ G + D + RLLG +P E
Sbjct: 91 TLDEVSLILGLAVDGKPVVGVKEKDEDPSQVCLRLLGKLPKGE----------------- 133
Query: 152 SYSRYSISLSKLRDRFRVMPKNATEREINWYTRALVLDIIGSMVFTDTSGDGVPAMYLQF 211
S ++ L++ F PK AT +EI ++TRA ++ I+GS +F T + YL
Sbjct: 134 -LSGNRVTAKWLKESFAECPKGATMKEIEYHTRAYLIYIVGSTIFATTDPSKISVDYLIL 192
Query: 212 MMNLSEQTEYNWGAAALSMLYRQLSIASEKERAEIS 247
+ + EY WGAAAL+ LYRQ+ AS++ ++ I
Sbjct: 193 FEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIG 228
>AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697
Length = 696
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 54 GFFQI--ARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G F+ A M +I ++ L+ ALVE+W P+T +F P GE TITL+DV L G + G P
Sbjct: 80 GIFEAIKASMYKIRKNQSLLLALVEKWCPETKSFLFPWGEATITLEDVLVLLGFSVQGSP 139
Query: 112 ITGQADGSWV-DMIERLLGIPME 133
+ + S + D +E+L +E
Sbjct: 140 VFAPLESSEMRDSVEKLEKARLE 162
>AT1G50820.1 | chr1:18833275-18834861 REVERSE LENGTH=529
Length = 528
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 44 SLCQTALENLGFFQ--IARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSC 101
SL + G F+ IA +I D L+ L E+W P T TF P GE TITL+DV
Sbjct: 69 SLHEPIWRKAGIFEAVIASTYKIPKDTDLVLGLAEKWCPDTKTFIFPWGEATITLEDVMV 128
Query: 102 LWGLPIHGRPITGQADGSWVDMIERLLGIPMEEQHMKQKKRKKEDDMTMVS 152
L G + G P+ D S +++ +L K+ K+ K D + +V+
Sbjct: 129 LLGFSVLGLPVFATVDSSGKEIMAKL---------EKEWKKIKNDKVCLVT 170
>AT1G50790.1 | chr1:18824050-18826488 REVERSE LENGTH=813
Length = 812
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 54 GFFQ--IARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G F+ +A +I + L+ + E+W P TNTF GE TITL+DV L G + G P
Sbjct: 83 GIFEAILASTYKIFKNTDLVMGIAEKWCPDTNTFVFSWGEATITLEDVMVLLGFSVLGSP 142
Query: 112 ITGQADGSWVDMIERL 127
+ D S +++ +L
Sbjct: 143 VFATLDSSGKEIMAKL 158
>AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667
Length = 666
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 54 GFFQI--ARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G F+ A I+ + LI +L + W P+TNTF P GE TITL+DV+ L G I G
Sbjct: 97 GIFEAIKASTYRIHKNPSLILSLAQNWCPETNTFVFPWGEATITLEDVNVLLGFSISGSS 156
Query: 112 ITGQADGSWV-DMIERL 127
+ S + + +E+L
Sbjct: 157 VFASLQSSEMKEAVEKL 173
>AT1G50770.1 | chr1:18818559-18820503 REVERSE LENGTH=633
Length = 632
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 GFFQ--IARMKEINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G F+ A +IN + L+ + E+W P T TF P GE TITL+DV L G + G P
Sbjct: 82 GIFEAVTASTYKINPNTELVLGIAEKWCPDTKTFVFPWGETTITLEDVMLLLGFSVLGSP 141
Query: 112 I 112
+
Sbjct: 142 V 142
>AT1G50830.1 | chr1:18835559-18837865 REVERSE LENGTH=769
Length = 768
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 54 GFFQIARMK--EINNDKYLISALVERWRPKTNTFHLPVGEMTITLQDVSCLWGLPIHGRP 111
G F+ ++ I + LI ++ E+W P+T +F P GE TITL+DV L G + G P
Sbjct: 101 GIFEAIKVSTYSITKNPSLILSVSEKWCPETKSFVFPWGEATITLEDVMVLLGFSVLGSP 160
Query: 112 ITGQADGSWV-DMIERLLGIPMEEQHMKQKKRKKEDDMTMVS 152
+ + S D +++L + + QHM ++ + VS
Sbjct: 161 VFAPLETSETRDSVKKLENVRI--QHMNSSTDRRVSQKSWVS 200
>AT1G50750.1 | chr1:18809184-18812050 REVERSE LENGTH=817
Length = 816
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 32 NIRLHRVGIPYHSLCQTALENLGFFQ--IARMKEINNDKYLISALVERWRPKTNTFHLPV 89
N + I +L + G F+ +A + I + LI + E+W P T TF P
Sbjct: 36 NTKFESWAIEMAALHEPTWREAGIFEAVMASIYRIPKNPDLILGIAEKWCPYTKTFVFPW 95
Query: 90 GEMTITLQDVSCLWGLPIHGRPITGQADGSWVDMIERL 127
GE +TL+DV L G + G P+ D S ++ +L
Sbjct: 96 GETAVTLEDVMVLSGFSVLGSPVFATLDSSGKEVKAKL 133
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,464,239
Number of extensions: 247356
Number of successful extensions: 600
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 595
Number of HSP's successfully gapped: 12
Length of query: 327
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 228
Effective length of database: 8,392,385
Effective search space: 1913463780
Effective search space used: 1913463780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)