Os07g0235700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0235700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 247.58 | 0.739 | 3.85 | -0.834 | 1.06 | 1.55 | 0.916 | -3.77 | -0.0129 | 9.78 | 24 | 1266 | -- | -- |
| 252.91 | 0.741 | 3.76 | 0.0202 | 1.19 | 1.47 | 1.3 | -- | 0.105 | 9.78 | 21.1 | 1172 | -- | -- |
| 250.71 | 0.737 | 3.86 | -0.88 | 1.07 | 1.57 | -- | -4.05 | -0.028 | 9.82 | 24 | 1252 | -- | -- |
| 255.9 | 0.745 | 3.75 | 0.154 | 1.05 | 1.27 | -- | -- | 0.174 | 9.78 | 21.12 | 1228 | -- | -- |
| 310.04 | 0.82 | 3.88 | -0.841 | -- | 1.38 | -- | -3.7 | -0.0248 | -- | 24 | 1407 | -- | -- |
| 301.68 | 0.814 | 3.68 | 0.567 | 0.953 | -- | 1.04 | -- | 0.453 | 9.09 | -- | -- | -- | -- |
| 305.48 | 0.818 | 3.68 | 0.604 | 0.949 | -- | -- | -- | 0.454 | 9.11 | -- | -- | -- | -- |
| 312.72 | 0.824 | 3.77 | 0.184 | -- | 1.14 | -- | -- | 0.193 | -- | 21.1 | 1432 | -- | -- |
| 256.6 | 0.746 | 3.75 | -- | 1.04 | 1.31 | -- | -- | 0.148 | 9.75 | 21 | 1247 | -- | -- |
| 357.5 | 0.883 | 3.71 | 0.602 | -- | -- | -- | -- | 0.46 | -- | -- | -- | -- | -- |
| 315.1 | 0.83 | 3.7 | -- | 0.95 | -- | -- | -- | 0.387 | 9.06 | -- | -- | -- | -- |
| 313.47 | 0.825 | 3.78 | -- | -- | 1.19 | -- | -- | 0.156 | -- | 20.9 | 1439 | -- | -- |
| 367.05 | 0.894 | 3.73 | -- | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 2 | 244.93 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 16 |
| 3 | 244.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 5 | 245.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 16 | 245.99 | temperature | 20 | 720 | > th | dose dependent | sin | 12 | NA |
| 19 | 246.28 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 20 | 246.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 23 | 246.38 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 76 | 247.78 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 87 | 248.01 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 95 | 248.18 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 140 | 248.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 149 | 249.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 172 | 249.44 | temperature | 25 | 1440 | < th | dose independent | sin | 14 | NA |
| 197 | 249.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 211 | 249.97 | temperature | 25 | 1440 | > th | dose independent | sin | 15 | NA |
| 267 | 250.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 321 | 251.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 326 | 251.29 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 341 | 251.45 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 347 | 251.53 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 15 |
| 369 | 251.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 383 | 251.78 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 408 | 251.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 22 |
| 414 | 251.90 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 425 | 251.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 430 | 251.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 442 | 251.99 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 462 | 252.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 465 | 252.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 501 | 252.19 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 537 | 252.31 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 8 |
| 548 | 252.34 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 562 | 252.39 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 18 |
| 599 | 252.53 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 22 |
| 608 | 252.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 637 | 252.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 21 |
| 724 | 252.86 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 853 | 253.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 867 | 253.27 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 931 | 253.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 952 | 253.51 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 977 | 253.60 | temperature | 25 | 1440 | > th | dose independent | rect. | 1 | 23 |