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Os07g0235600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.86 (0.0307) R2 : 0.505
β1 : -1.26 (0.113) R2dD : 0.14 R2D : 0.0942
β2 : 1.46 (0.0793) R2dC : 0.368 R2C : 0.339
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.403 (0.0656) R2dN8 : 0.0548 R2N8 : 0.00563
σ : 0.578
deviance : 152.37
__
_____
C
peak time of C : 4.69
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
128.44 0.532 6.75 -0.674 1.39 0.126 1.64 3.74 -0.261 5.01 30 1246 -- --
131.49 0.534 6.83 -1.39 1.43 0.591 1.83 -- -0.264 4.99 31.4 2618 -- --
135.11 0.541 6.75 -0.674 1.39 0.133 -- 3.8 -0.267 4.84 30.08 1250 -- --
137.62 0.546 6.81 -1.42 1.46 0.617 -- -- -0.215 4.78 30.51 1262 -- --
236.09 0.716 6.75 -0.542 -- 0.201 -- 4.57 -0.208 -- 30.2 1256 -- --
144.61 0.564 6.86 -1.25 1.45 -- 1.75 -- -0.393 4.83 -- -- -- --
152.37 0.578 6.86 -1.26 1.46 -- -- -- -0.403 4.69 -- -- -- --
239.53 0.721 6.84 -1.42 -- 0.721 -- -- -0.2 -- 30.54 1264 -- --
186.55 0.636 6.82 -- 1.39 0.417 -- -- -0.193 4.88 32.51 1173 -- --
265.27 0.761 6.88 -1.2 -- -- -- -- -0.364 -- -- -- -- --
193.98 0.652 6.83 -- 1.44 -- -- -- -0.263 4.71 -- -- -- --
288.47 0.791 6.82 -- -- 0.541 -- -- -0.116 -- 32.4 1201 -- --
303.31 0.813 6.85 -- -- -- -- -- -0.231 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 120.22 humidity 90.0 270 < th dose independent rect. 7 5
2 121.05 humidity 90.0 90 < th dose dependent rect. 22 14
3 121.18 temperature 10.0 270 > th dose dependent rect. 1 6
6 121.52 wind 5.0 270 < th dose dependent rect. 1 6
7 121.55 humidity 90.0 270 < th dose independent rect. 24 12
8 121.59 humidity 60.0 90 > th dose dependent rect. 3 8
12 121.69 humidity 80.0 10 < th dose independent rect. 9 3
19 122.02 temperature 15.0 270 > th dose independent rect. 7 5
29 122.24 humidity 90.0 90 < th dose dependent rect. 8 4
32 122.29 wind 5.0 90 < th dose dependent rect. 3 6
43 122.47 precipitation 0.1 270 < th dose independent rect. 12 19
45 122.47 precipitation 0.1 270 < th dose dependent rect. 12 19
53 122.63 radiation 1.0 270 > th dose independent rect. 7 5
57 122.65 wind 3.0 270 < th dose independent rect. 1 6
74 122.85 wind 1.0 90 > th dose independent rect. 22 14
82 122.91 humidity 90.0 90 < th dose dependent rect. 4 8
85 122.93 humidity 90.0 90 < th dose dependent sin 6 NA
89 122.97 wind 5.0 270 < th dose dependent rect. 2 4
93 123.01 wind 9.0 270 < th dose dependent rect. 13 18
103 123.15 humidity 50.0 90 > th dose dependent sin 7 NA
114 123.22 wind 7.0 270 < th dose independent rect. 7 5
118 123.25 precipitation 0.1 90 < th dose independent rect. 3 16
119 123.25 precipitation 0.1 90 < th dose dependent rect. 3 16
138 123.45 humidity 60.0 270 > th dose dependent rect. 1 7
148 123.53 wind 9.0 270 < th dose independent rect. 12 19
160 123.58 precipitation 0.1 270 < th dose independent rect. 1 6
162 123.58 precipitation 0.1 270 < th dose dependent rect. 1 6
176 123.67 atmosphere 1015.0 270 < th dose dependent rect. 3 2
178 123.68 precipitation 0.1 270 < th dose independent rect. 7 5
182 123.68 precipitation 0.1 270 < th dose dependent rect. 7 5
186 123.69 wind 3.0 270 < th dose dependent rect. 3 2
204 123.82 atmosphere 995.0 270 > th dose independent rect. 7 5
205 123.82 atmosphere 1015.0 270 < th dose independent rect. 7 5
206 123.82 temperature 10.0 270 > th dose independent rect. 12 19
217 123.88 precipitation 0.1 270 < th dose independent rect. 12 9
218 123.88 atmosphere 1015.0 270 < th dose dependent rect. 1 6
219 123.88 precipitation 0.1 270 < th dose dependent rect. 12 9
224 123.90 temperature 15.0 270 > th dose independent rect. 21 15
240 124.01 temperature 15.0 270 > th dose independent rect. 7 18
246 124.03 wind 3.0 270 < th dose independent rect. 2 4
269 124.11 wind 1.0 270 > th dose independent rect. 7 5
281 124.18 atmosphere 1015.0 90 < th dose dependent rect. 3 6
282 124.18 radiation 30.0 270 < th dose dependent rect. 1 7
292 124.24 radiation 40.0 30 < th dose independent rect. 3 8
304 124.30 atmosphere 1015.0 270 < th dose dependent rect. 2 4
306 124.31 humidity 50.0 270 > th dose independent rect. 7 5
312 124.34 radiation 20.0 270 < th dose independent rect. 1 6
315 124.35 humidity 70.0 270 > th dose independent rect. 1 6
341 124.44 temperature 10.0 270 > th dose independent rect. 1 6
343 124.44 temperature 30.0 270 < th dose independent rect. 1 6
344 124.44 humidity 50.0 270 > th dose independent rect. 1 6
346 124.44 atmosphere 995.0 270 > th dose independent rect. 1 6
347 124.44 atmosphere 1015.0 270 < th dose independent rect. 1 6
362 124.48 atmosphere 995.0 270 > th dose independent rect. 17 9
421 124.72 wind 9.0 270 < th dose independent rect. 7 18
438 124.79 humidity 80.0 10 < th dose independent rect. 23 16
442 124.80 wind 9.0 270 < th dose independent rect. 12 9
448 124.82 radiation 40.0 90 < th dose dependent rect. 3 7
484 124.95 wind 1.0 270 > th dose independent rect. 12 9
486 124.95 wind 9.0 270 < th dose independent rect. 21 15
495 124.97 wind 9.0 90 < th dose dependent rect. 3 16
499 124.98 wind 9.0 270 < th dose independent rect. 2 15
509 125.00 humidity 60.0 270 > th dose dependent rect. 2 4
512 125.02 radiation 30.0 30 < th dose independent rect. 12 23
527 125.07 radiation 40.0 270 < th dose dependent rect. 17 9
529 125.08 temperature 10.0 270 > th dose independent rect. 17 9
530 125.08 radiation 20.0 270 < th dose independent rect. 17 9
533 125.08 temperature 10.0 270 > th dose independent rect. 2 15
534 125.08 atmosphere 1015.0 270 < th dose independent rect. 2 15
547 125.10 radiation 30.0 10 < th dose independent rect. 14 21
550 125.11 temperature 10.0 270 > th dose independent rect. 12 9
552 125.11 atmosphere 995.0 270 > th dose independent rect. 21 15
587 125.20 precipitation 0.1 90 < th dose independent rect. 3 6
588 125.20 precipitation 0.1 90 < th dose dependent rect. 3 6
596 125.22 wind 9.0 270 < th dose independent rect. 17 9
602 125.24 precipitation 0.1 270 < th dose independent rect. 2 4
604 125.24 precipitation 0.1 270 < th dose dependent rect. 2 4
615 125.28 humidity 80.0 90 < th dose independent sin 4 NA
618 125.30 atmosphere 1015.0 270 < th dose independent rect. 7 18
634 125.38 humidity 80.0 90 > th dose independent rect. 3 8
648 125.42 precipitation 0.1 270 < th dose independent rect. 3 2
650 125.42 precipitation 0.1 270 < th dose dependent rect. 3 2
655 125.43 humidity 80.0 270 > th dose dependent rect. 1 14
662 125.45 radiation 1.0 270 > th dose independent rect. 4 8
672 125.45 wind 1.0 270 > th dose independent rect. 7 18
714 125.55 humidity 80.0 10 < th dose independent rect. 5 10
740 125.59 humidity 50.0 270 > th dose independent rect. 17 9
743 125.60 radiation 40.0 270 < th dose independent rect. 13 17
748 125.61 wind 9.0 270 < th dose dependent rect. 7 5
749 125.61 humidity 70.0 90 > th dose dependent rect. 3 12
753 125.62 humidity 60.0 90 > th dose dependent rect. 3 14
757 125.63 humidity 60.0 90 > th dose dependent rect. 3 16
767 125.66 wind 9.0 90 < th dose independent rect. 19 8
768 125.66 temperature 10.0 90 > th dose independent rect. 19 8
769 125.66 temperature 30.0 90 < th dose independent rect. 19 8
770 125.66 humidity 50.0 90 > th dose independent rect. 19 8
772 125.66 atmosphere 995.0 90 > th dose independent rect. 19 8
773 125.66 radiation 1.0 90 < th dose independent rect. 19 8
779 125.66 atmosphere 1015.0 270 < th dose independent rect. 12 9
785 125.66 radiation 1.0 90 < th dose dependent rect. 19 8
793 125.68 humidity 70.0 720 > th dose independent rect. 17 9
802 125.69 atmosphere 995.0 270 > th dose independent rect. 12 19
807 125.70 temperature 15.0 270 > th dose independent rect. 6 20
817 125.73 humidity 50.0 270 > th dose dependent sin 9 NA
818 125.73 temperature 10.0 270 > th dose dependent rect. 7 5
840 125.76 wind 3.0 90 < th dose independent rect. 3 8
857 125.79 humidity 60.0 270 > th dose dependent rect. 3 2
860 125.80 humidity 60.0 90 > th dose independent rect. 3 6
914 125.87 humidity 80.0 10 < th dose independent rect. 11 1
921 125.88 radiation 10.0 270 < th dose independent rect. 2 4
923 125.88 temperature 10.0 90 > th dose independent rect. 3 6
926 125.88 atmosphere 995.0 90 > th dose independent rect. 3 6
927 125.88 atmosphere 1015.0 90 < th dose independent rect. 3 6
948 125.92 temperature 20.0 30 > th dose independent rect. 11 1
949 125.92 precipitation 0.1 270 < th dose independent rect. 21 15
950 125.92 precipitation 0.1 270 < th dose dependent rect. 21 15
952 125.93 humidity 50.0 270 > th dose independent rect. 21 15