Os07g0232200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flavohemoprotein b5/b5R variant.
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Os07g0232200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Flavohemoprotein b5/b5R variant.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.81 | 0.261 | 10.9 | -0.421 | 0.392 | 0.245 | -0.304 | -0.0336 | 0.111 | 5.59 | 39.12 | 15 | -- | -- |
| 30.8 | 0.258 | 10.9 | -0.421 | 0.391 | 0.248 | -0.316 | -- | 0.111 | 5.59 | 39.01 | 19 | -- | -- |
| 31.02 | 0.259 | 10.9 | -0.423 | 0.391 | 0.254 | -- | -0.0245 | 0.111 | 5.68 | 39.02 | 19 | -- | -- |
| 31.02 | 0.259 | 10.9 | -0.422 | 0.39 | 0.256 | -- | -- | 0.111 | 5.68 | 39.23 | 19 | -- | -- |
| 34.69 | 0.274 | 10.9 | -0.355 | -- | 0.448 | -- | -0.289 | 0.182 | -- | 36.87 | 548 | -- | -- |
| 32.51 | 0.267 | 10.9 | -0.417 | 0.413 | -- | -0.35 | -- | 0.114 | 4.87 | -- | -- | -- | -- |
| 32.82 | 0.268 | 10.9 | -0.415 | 0.411 | -- | -- | -- | 0.116 | 4.91 | -- | -- | -- | -- |
| 32.51 | 0.266 | 10.9 | -0.419 | -- | 0.464 | -- | -- | 0.149 | -- | 8.29 | 591 | -- | -- |
| 35.69 | 0.278 | 10.9 | -- | 0.398 | 0.245 | -- | -- | 0.158 | 5.63 | 40.02 | 18 | -- | -- |
| 41.75 | 0.302 | 10.9 | -0.4 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 37.37 | 0.286 | 10.9 | -- | 0.404 | -- | -- | -- | 0.162 | 4.95 | -- | -- | -- | -- |
| 36.51 | 0.281 | 10.9 | -- | -- | 0.449 | -- | -- | 0.166 | -- | 10.03 | 557 | -- | -- |
| 45.97 | 0.316 | 10.9 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.64 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 2 | 28.71 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 3 | 28.77 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 4 | 28.90 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 28.95 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 29.06 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 9 | 29.07 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 15 | 29.46 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 10 |
| 17 | 29.56 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 11 |
| 24 | 29.61 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 34 | 29.65 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 78 | 29.80 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 89 | 29.85 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 110 | 29.92 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 132 | 29.98 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 23 | 4 |
| 163 | 30.07 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 169 | 30.08 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 171 | 30.08 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 179 | 30.10 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 230 | 30.22 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 253 | 30.29 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 263 | 30.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 15 |
| 271 | 30.34 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 274 | 30.35 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 278 | 30.35 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 279 | 30.35 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 292 | 30.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 323 | 30.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 339 | 30.41 | radiation | 40.0 | 270 | < th | dose independent | sin | 9 | NA |
| 354 | 30.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 362 | 30.42 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 364 | 30.42 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 366 | 30.43 | humidity | 80.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 370 | 30.43 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 378 | 30.43 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 404 | 30.45 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 440 | 30.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 464 | 30.50 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 488 | 30.51 | humidity | 80.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 497 | 30.51 | radiation | 40.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 510 | 30.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 527 | 30.52 | radiation | 40.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 545 | 30.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 569 | 30.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 574 | 30.54 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 576 | 30.54 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 601 | 30.55 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 602 | 30.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 604 | 30.55 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 607 | 30.55 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 614 | 30.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 642 | 30.56 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 644 | 30.56 | wind | 3.0 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 649 | 30.56 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 651 | 30.56 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 682 | 30.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 684 | 30.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 694 | 30.57 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 695 | 30.57 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 741 | 30.58 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 758 | 30.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 801 | 30.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 822 | 30.60 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 873 | 30.60 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 874 | 30.61 | radiation | 40.0 | 270 | > th | dose independent | sin | 10 | NA |
| 877 | 30.61 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 878 | 30.61 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 882 | 30.61 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 915 | 30.62 | wind | 3.0 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 948 | 30.63 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 953 | 30.63 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 966 | 30.63 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 985 | 30.64 | radiation | 40.0 | 270 | > th | dose independent | rect. | 8 | 3 |