BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0232200 Os07g0232200|AK103406
(218 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212 197 3e-51
AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136 64 6e-11
AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135 60 8e-10
AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135 60 1e-09
AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918 57 7e-09
AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133 56 2e-08
AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141 54 6e-08
AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918 54 7e-08
AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450 53 1e-07
AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450 52 3e-07
>AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212
Length = 211
Score = 197 bits (501), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 86/105 (81%), Positives = 96/105 (91%)
Query: 111 FEKGYSQMDWLKLTRTHPDLAGLKGQLNRRLISLEEVKQHKTGDSIWTVLKGRVYNIAPY 170
FEKGYSQMDWLKLTRTHPDLAGLKG+ N+RLI ++EVK+H+TGDS+WTVLKGRVYNI+PY
Sbjct: 98 FEKGYSQMDWLKLTRTHPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPY 157
Query: 171 MKFHPGGVDMLMKAAGKDSTALFNKYHAWVNFEFLLEKCLVGFLD 215
M FHPGGVDMLMKA G+D T LFNKYHAWVN + LLEKCLVG LD
Sbjct: 158 MNFHPGGVDMLMKAVGRDGTLLFNKYHAWVNVDILLEKCLVGVLD 202
>AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136
Length = 135
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHAW 199
+L S+EE H D W V+ G+VY+++ YM HPGG D+L+ AGKD+T F
Sbjct: 6 KLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGHS 65
Query: 200 VNFEFLLEKCLVGFLD 215
+ L+EK +G LD
Sbjct: 66 KDARELMEKYFIGELD 81
>AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135
Length = 134
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 138 NRRLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYH 197
+R+++S EEV +H W ++ G+VY++ P+M HPGG ++L+ + GKD+T F
Sbjct: 4 DRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVG 63
Query: 198 AWVNFEFLLEKCLVGFLD 215
+++K +G +D
Sbjct: 64 HSDTARDMMDKYFIGEID 81
>AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135
Length = 134
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHAW 199
++ +L EV +H W V+ G+VYN+ +++ HPGG D+L+ + GKD+T F
Sbjct: 6 KIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHS 65
Query: 200 VNFEFLLEKCLVGFLDPN 217
+ ++E+ VG +DP
Sbjct: 66 ESAREMMEQYYVGEIDPT 83
>AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918
Length = 917
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHA 198
++ S+ EV++H T DS W ++ G +Y+ ++K HPGG D ++ AG D T F H+
Sbjct: 546 KMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHS 604
>AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133
Length = 132
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 141 LISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHAWV 200
LIS +V +HK + W ++ G+VY+I+ +M HPGG ++L+ GKD++ F +
Sbjct: 4 LISFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFEDVNHSK 63
Query: 201 NFEFLLEKCLVGFLD 215
+ + L++K +G +D
Sbjct: 64 DAKELMKKYCIGDVD 78
>AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141
Length = 140
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHAW 199
++ +L EV QH + W V+ G+VY++ ++ HPGG ++++ + GKD+T F
Sbjct: 6 KVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFEDVGHS 65
Query: 200 VNFEFLLEKCLVGFLD 215
+ +L++ VG +D
Sbjct: 66 STAKAMLDEYYVGDID 81
>AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918
Length = 917
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYHA 198
++ S+ EVK+H + DS W ++ G +Y+ ++ HPGG D ++ AG D T F H+
Sbjct: 543 KMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAIHS 601
>AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450
Length = 449
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 136 QLNRRLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNK 195
Q +R ++ E++K+H +W ++G+VY+++ ++K HPGG ++ AG+D T F
Sbjct: 4 QTKKRYVTSEDLKKHNKPGDLWISIQGKVYDVSDWVKSHPGGEAAILNLAGQDVTDAFIA 63
Query: 196 YH---AWVNFE 203
YH AW + E
Sbjct: 64 YHPGTAWHHLE 74
>AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450
Length = 449
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 139 RRLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFNKYH- 197
++ I+ E++K+H +W ++G+VYN++ ++K HPGG +++ G+D T F +H
Sbjct: 7 KKYITNEDLKKHNKSGDLWIAIQGKVYNVSDWIKTHPGGDTVILNLVGQDVTDAFIAFHP 66
Query: 198 --AWVNFEFLL 206
AW + + L
Sbjct: 67 GTAWHHLDHLF 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,476,250
Number of extensions: 161324
Number of successful extensions: 197
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 197
Number of HSP's successfully gapped: 10
Length of query: 218
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 123
Effective length of database: 8,502,049
Effective search space: 1045752027
Effective search space used: 1045752027
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 109 (46.6 bits)