Os07g0229900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.
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Os07g0229900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.11 | 0.444 | 12.6 | 0.094 | 1.18 | 0.573 | 0.851 | -1.25 | -0.152 | 17.1 | 19.8 | 2757 | -- | -- |
| 91.26 | 0.445 | 12.6 | 0.307 | 1.18 | 0.835 | 0.989 | -- | -0.101 | 17 | 19.41 | 2584 | -- | -- |
| 90.89 | 0.444 | 12.6 | 0.0778 | 1.19 | 0.574 | -- | -1.32 | -0.153 | 17 | 19.9 | 2730 | -- | -- |
| 93.46 | 0.45 | 12.6 | 0.283 | 1.19 | 0.857 | -- | -- | -0.0984 | 17 | 19.4 | 2588 | -- | -- |
| 163.86 | 0.596 | 12.6 | 0.162 | -- | 0.59 | -- | -1.03 | -0.139 | -- | 19.49 | 2067 | -- | -- |
| 103.63 | 0.477 | 12.6 | 0.715 | 1.15 | -- | 1.06 | -- | 0.0851 | 17.1 | -- | -- | -- | -- |
| 106.47 | 0.483 | 12.6 | 0.716 | 1.15 | -- | -- | -- | 0.0903 | 17.1 | -- | -- | -- | -- |
| 165 | 0.598 | 12.6 | 0.34 | -- | 0.804 | -- | -- | -0.0846 | -- | 19.4 | 1796 | -- | -- |
| 95.29 | 0.455 | 12.6 | -- | 1.19 | 0.938 | -- | -- | -0.136 | 17.1 | 19.4 | 2601 | -- | -- |
| 176.43 | 0.621 | 12.5 | 0.675 | -- | -- | -- | -- | 0.0609 | -- | -- | -- | -- | -- |
| 119.99 | 0.512 | 12.6 | -- | 1.14 | -- | -- | -- | 0.0105 | 17.1 | -- | -- | -- | -- |
| 166.77 | 0.601 | 12.6 | -- | -- | 0.939 | -- | -- | -0.123 | -- | 19 | 3324 | -- | -- |
| 188.45 | 0.641 | 12.6 | -- | -- | -- | -- | -- | -0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 3 | 82.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 5 | 82.24 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 6 | 82.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 31 | 83.58 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 86 | 84.94 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 87 | 84.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 92 | 85.12 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 97 | 85.23 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 100 | 85.25 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 150 | 85.87 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 166 | 86.01 | temperature | 25 | 90 | > th | dose dependent | sin | 5 | NA |
| 180 | 86.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 223 | 86.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 246 | 86.63 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 411 | 87.61 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 3 |
| 466 | 87.83 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 5 |
| 515 | 88.04 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 539 | 88.16 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 1 |
| 542 | 88.16 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 616 | 88.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 655 | 88.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 682 | 88.71 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 684 | 88.72 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 696 | 88.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 850 | 89.19 | radiation | 40 | 90 | < th | dose independent | rect. | 4 | 15 |
| 879 | 89.26 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 901 | 89.31 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 916 | 89.34 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 952 | 89.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 961 | 89.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 976 | 89.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |