BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0229900 Os07g0229900|AK121720
         (138 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32060.1  | chr2:13639228-13640104 REVERSE LENGTH=145          184   9e-48
AT1G15930.2  | chr1:5471702-5472741 FORWARD LENGTH=145            182   3e-47

>AT2G32060.1 | chr2:13639228-13640104 REVERSE LENGTH=145
          Length = 144

 Score =  184 bits (468), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 107/122 (87%)

Query: 17  EPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALC 76
           E MD+ TAL+L ++KS A+ G+V+GL E+AK IEK  AQLCVLAEDC+QPDYVKLVKALC
Sbjct: 23  EDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALC 82

Query: 77  AEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNIVQDYVK 136
           A+H++ L+TVPSAKTLGEWAGLCKIDSEG ARKVVGCSC+V+KDFGEE+  LNIV+ ++ 
Sbjct: 83  ADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLD 142

Query: 137 SH 138
           S+
Sbjct: 143 SN 144



>AT1G15930.2 | chr1:5471702-5472741 FORWARD LENGTH=145
          Length = 144

 Score =  182 bits (463), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 103/122 (84%)

Query: 17  EPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALC 76
           E MDLMTAL+L ++K+ A+ G+V+GL E AK IEK  AQL VLAEDC+QPDYVKLVKALC
Sbjct: 23  EDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALC 82

Query: 77  AEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNIVQDYVK 136
           A+H V L+TVPSAKTLGEWAGLCKIDSEG ARKVVGCSC+VVKDFGEE+  L+IV  ++ 
Sbjct: 83  ADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVKDFGEETTALSIVNKHIA 142

Query: 137 SH 138
           S 
Sbjct: 143 SQ 144



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,594,551
Number of extensions: 93166
Number of successful extensions: 260
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 260
Number of HSP's successfully gapped: 2
Length of query: 138
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 50
Effective length of database: 8,693,961
Effective search space: 434698050
Effective search space used: 434698050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)