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Os07g0227700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.44 (0.0155) R2 : 0.0893
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.218 (0.0326) R2dN8 : 0.115 R2N8 : 0.0893
σ : 0.292
deviance : 39.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.6 0.218 9.54 -0.792 0.49 -2.13 -0.235 10.9 -0.213 11 1000 274 -- --
22.67 0.222 9.43 -0.0985 0.488 -0.591 -0.256 -- -0.223 11.1 995.8 491 -- --
21.83 0.218 9.54 -0.797 0.49 -2.12 -- 10.9 -0.214 11.1 1000 289 -- --
22.82 0.222 9.43 -0.118 0.489 -0.538 -- -- -0.218 11.1 996.3 449 -- --
36.56 0.282 9.55 -0.744 -- -2.23 -- 11.4 -0.219 -- 999.3 389 -- --
24.06 0.23 9.43 -0.0857 0.481 -- -0.26 -- -0.226 11 -- -- -- --
24.34 0.231 9.43 -0.096 0.482 -- -- -- -0.226 11.1 -- -- -- --
37.25 0.284 9.44 -0.137 -- -0.305 -- -- -0.218 -- 998.3 100 -- --
23.18 0.224 9.42 -- 0.491 -0.513 -- -- -0.207 11.1 996.4 454 -- --
38.81 0.291 9.44 -0.107 -- -- -- -- -0.23 -- -- -- -- --
24.58 0.232 9.43 -- 0.483 -- -- -- -0.216 11.1 -- -- -- --
37.75 0.286 9.43 -- -- -0.281 -- -- -0.204 -- 998.2 81 -- --
39.11 0.292 9.44 -- -- -- -- -- -0.218 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.63 radiation 1.0 43200 < th dose dependent rect. 21 4
3 20.69 radiation 1.0 43200 < th dose dependent rect. 21 6
7 20.95 temperature 25.0 4320 > th dose independent rect. 1 2
8 20.95 radiation 1.0 43200 < th dose dependent rect. 24 1
19 21.12 wind 1.0 14400 < th dose dependent rect. 2 1
20 21.14 temperature 25.0 4320 > th dose dependent rect. 24 2
23 21.20 temperature 25.0 4320 > th dose dependent rect. 24 5
28 21.24 temperature 30.0 270 < th dose independent rect. 10 9
35 21.32 atmosphere 995.0 14400 > th dose independent rect. 18 3
37 21.32 temperature 25.0 30 > th dose dependent rect. 12 23
40 21.34 temperature 30.0 30 < th dose dependent rect. 12 8
41 21.35 temperature 30.0 270 < th dose independent rect. 22 21
53 21.42 wind 5.0 14400 > th dose independent rect. 20 1
60 21.45 wind 5.0 14400 < th dose independent rect. 20 1
61 21.45 precipitation 0.1 14400 > th dose dependent rect. 17 2
67 21.46 atmosphere 1000.0 270 < th dose independent rect. 11 20
74 21.47 precipitation 0.1 4320 > th dose dependent rect. 11 8
81 21.48 precipitation 0.1 14400 > th dose dependent rect. 17 4
83 21.48 temperature 25.0 720 > th dose dependent rect. 7 8
122 21.53 wind 5.0 14400 > th dose dependent rect. 19 2
138 21.56 temperature 25.0 30 < th dose independent rect. 13 7
145 21.57 atmosphere 1000.0 10 > th dose independent rect. 11 23
152 21.58 temperature 30.0 1440 > th dose independent rect. 9 5
180 21.59 atmosphere 1000.0 270 < th dose dependent rect. 13 19
182 21.59 atmosphere 1000.0 270 < th dose dependent rect. 13 22
183 21.60 temperature 30.0 1440 < th dose independent rect. 24 14
198 21.61 atmosphere 1000.0 270 > th dose independent no NA NA
200 21.61 temperature 30.0 1440 < th dose independent rect. 6 8
203 21.61 temperature 30.0 1440 < th dose independent rect. 2 12
216 21.61 temperature 15.0 30 > th dose dependent rect. 7 17
217 21.62 atmosphere 1000.0 270 < th dose independent no NA NA
218 21.62 temperature 30.0 1440 < th dose independent rect. 9 5
233 21.63 atmosphere 1000.0 270 < th dose independent rect. 1 23
234 21.63 atmosphere 1000.0 270 < th dose independent rect. 23 23
247 21.64 atmosphere 1000.0 270 > th dose independent sin 15 NA
248 21.64 precipitation 0.1 14400 < th dose independent rect. 17 2
250 21.64 precipitation 0.1 14400 < th dose dependent rect. 17 2
265 21.65 precipitation 0.1 14400 > th dose independent rect. 17 2
269 21.65 humidity 70.0 90 > th dose independent rect. 12 19
291 21.66 atmosphere 1000.0 270 < th dose independent rect. 21 23
311 21.67 temperature 25.0 720 > th dose dependent sin 3 NA
315 21.67 wind 9.0 14400 > th dose dependent rect. 16 5
325 21.68 temperature 30.0 1440 < th dose independent sin 8 NA
330 21.68 atmosphere 1000.0 270 < th dose independent rect. 19 23
343 21.69 temperature 25.0 720 > th dose dependent rect. 12 3
352 21.70 temperature 30.0 4320 > th dose independent rect. 11 1
362 21.70 temperature 25.0 720 > th dose dependent rect. 12 1
363 21.70 wind 9.0 14400 > th dose dependent rect. 17 2
379 21.71 precipitation 0.1 4320 < th dose independent rect. 13 5
380 21.71 precipitation 0.1 4320 < th dose independent rect. 11 7
384 21.71 atmosphere 1000.0 270 < th dose dependent no NA NA
387 21.71 precipitation 0.1 4320 < th dose dependent rect. 13 5
391 21.71 precipitation 0.1 4320 < th dose dependent rect. 11 7
400 21.71 wind 9.0 14400 > th dose dependent rect. 17 18
404 21.71 atmosphere 1000.0 270 < th dose dependent rect. 21 23
405 21.71 radiation 20.0 10 < th dose dependent rect. 17 23
406 21.72 temperature 30.0 1440 > th dose independent sin 7 NA
409 21.72 precipitation 0.1 4320 > th dose independent rect. 13 5
440 21.72 atmosphere 1000.0 270 < th dose dependent rect. 18 23
443 21.73 temperature 30.0 4320 < th dose independent rect. 11 1
444 21.73 wind 1.0 14400 > th dose independent rect. 1 2
458 21.73 temperature 30.0 270 < th dose independent rect. 11 18
526 21.75 atmosphere 995.0 14400 < th dose independent rect. 17 1
530 21.75 wind 9.0 14400 > th dose independent rect. 16 5
534 21.75 atmosphere 1000.0 1440 < th dose independent rect. 21 12
541 21.75 precipitation 0.1 4320 > th dose dependent sin 22 NA
542 21.75 atmosphere 995.0 14400 < th dose dependent rect. 17 1
570 21.75 precipitation 0.1 14400 > th dose dependent rect. 6 17
574 21.75 atmosphere 1000.0 270 < th dose dependent rect. 1 23
576 21.76 atmosphere 1000.0 1440 > th dose independent rect. 3 1
582 21.76 wind 9.0 14400 < th dose independent rect. 17 4
588 21.76 atmosphere 1000.0 1440 < th dose independent rect. 21 10
622 21.77 wind 1.0 14400 < th dose independent rect. 5 1
667 21.78 wind 1.0 14400 < th dose independent rect. 2 1
686 21.78 atmosphere 1000.0 1440 > th dose independent rect. 21 11
692 21.78 precipitation 0.1 14400 > th dose dependent sin 18 NA
718 21.78 temperature 10.0 30 > th dose dependent rect. 3 23
724 21.79 wind 1.0 14400 < th dose independent rect. 24 6
744 21.79 temperature 30.0 270 < th dose independent rect. 10 20
772 21.80 atmosphere 1000.0 1440 < th dose independent rect. 21 6
774 21.80 atmosphere 1000.0 1440 > th dose independent rect. 21 9
795 21.80 temperature 30.0 4320 > th dose dependent rect. 11 1
829 21.81 atmosphere 1000.0 1440 < th dose independent rect. 21 4
921 21.83 wind 1.0 14400 > th dose independent rect. 24 6
964 21.83 radiation 20.0 90 < th dose dependent rect. 12 23
966 21.84 atmosphere 1000.0 1440 > th dose independent rect. 1 1
968 21.84 atmosphere 1000.0 1440 < th dose independent rect. 21 2
973 21.84 atmosphere 1000.0 1440 > th dose independent rect. 1 7