Os07g0211800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1749 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0211800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1749 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.2 | 0.258 | 10.1 | -0.853 | 0.572 | 1.07 | 0.183 | -0.8 | -0.236 | 3.69 | 25.3 | 412 | -- | -- |
| 30.28 | 0.256 | 10.1 | -0.752 | 0.551 | 1 | 0.258 | -- | -0.21 | 3.73 | 25.4 | 441 | -- | -- |
| 30.25 | 0.256 | 10.1 | -0.841 | 0.555 | 1.06 | -- | -0.738 | -0.226 | 3.77 | 25.43 | 437 | -- | -- |
| 30.45 | 0.257 | 10.1 | -0.752 | 0.527 | 0.984 | -- | -- | -0.205 | 3.89 | 25.42 | 473 | -- | -- |
| 33.95 | 0.271 | 10.1 | -0.814 | -- | 0.775 | -- | -0.121 | -0.177 | -- | 26.34 | 2286 | -- | -- |
| 46.97 | 0.321 | 10.1 | -0.562 | 0.29 | -- | 0.447 | -- | -0.14 | 23.6 | -- | -- | -- | -- |
| 47.76 | 0.324 | 10.1 | -0.582 | 0.289 | -- | -- | -- | -0.143 | 0.0679 | -- | -- | -- | -- |
| 33.96 | 0.271 | 10.1 | -0.794 | -- | 0.756 | -- | -- | -0.171 | -- | 26.34 | 2306 | -- | -- |
| 44.57 | 0.311 | 10.1 | -- | 0.452 | 0.808 | -- | -- | -0.0938 | 3.33 | 26.09 | 443 | -- | -- |
| 53.03 | 0.34 | 10.1 | -0.573 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 56.68 | 0.352 | 10.1 | -- | 0.282 | -- | -- | -- | -0.0782 | 24 | -- | -- | -- | -- |
| 48.48 | 0.324 | 10.1 | -- | -- | 0.626 | -- | -- | -0.0368 | -- | 27.61 | 947 | -- | -- |
| 61.68 | 0.367 | 10.1 | -- | -- | -- | -- | -- | -0.0753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 2 | 29.72 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 3 | 29.77 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 17 |
| 8 | 30.31 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 15 | 30.48 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 17 | 30.50 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 29 | 30.72 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 20 |
| 39 | 30.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 42 | 30.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 45 | 30.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 46 | 30.88 | radiation | 30 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 47 | 30.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 52 | 30.95 | temperature | 25 | 270 | > th | dose dependent | sin | 20 | NA |
| 56 | 30.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 98 | 31.09 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 20 |
| 103 | 31.11 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 114 | 31.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 116 | 31.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 126 | 31.19 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 12 |
| 128 | 31.19 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 144 | 31.24 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 152 | 31.24 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 163 | 31.25 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 187 | 31.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 225 | 31.33 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 270 | 31.38 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 295 | 31.40 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 353 | 31.43 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 356 | 31.44 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 362 | 31.44 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 381 | 31.46 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 418 | 31.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 421 | 31.48 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 430 | 31.48 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 469 | 31.50 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 22 |
| 501 | 31.51 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 542 | 31.54 | temperature | 25 | 4320 | > th | dose dependent | sin | 3 | NA |
| 582 | 31.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 606 | 31.57 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 608 | 31.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 659 | 31.58 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 823 | 31.65 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 826 | 31.65 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 852 | 31.66 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 904 | 31.68 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 971 | 31.71 | temperature | 20 | 14400 | > th | dose dependent | sin | 21 | NA |