Os07g0209000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dolichyl-di-phosphooligosaccharide-protein glycotransferase (Oligosaccharyltransferase)-like.
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Os07g0209000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dolichyl-di-phosphooligosaccharide-protein glycotransferase (Oligosaccharyltransferase)-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67 | 0.385 | 11.1 | 1.62 | 0.336 | -0.139 | -0.014 | 2.02 | 0.581 | 21 | 1 | 18890 | -- | -- |
| 73.32 | 0.399 | 11 | 1.58 | 0.313 | 0.233 | 0.198 | -- | 0.542 | 20.5 | 6 | 5756 | -- | -- |
| 67 | 0.381 | 11.1 | 1.62 | 0.336 | -0.139 | -- | 2.02 | 0.581 | 21 | 1 | 18889 | -- | -- |
| 71.21 | 0.393 | 11.1 | 1.8 | 0.362 | 0.437 | -- | -- | 0.528 | 20.8 | 7.116 | 5793 | -- | -- |
| 73.38 | 0.399 | 11.1 | 1.6 | -- | -0.121 | -- | 2.15 | 0.574 | -- | 1.16 | 18808 | -- | -- |
| 75.16 | 0.406 | 11 | 1.55 | 0.335 | -- | 0.0349 | -- | 0.584 | 21.1 | -- | -- | -- | -- |
| 75.16 | 0.406 | 11 | 1.55 | 0.335 | -- | -- | -- | 0.584 | 21.1 | -- | -- | -- | -- |
| 76.95 | 0.409 | 11.1 | 1.78 | -- | 0.499 | -- | -- | 0.523 | -- | 7.163 | 5208 | -- | -- |
| 91.82 | 0.446 | 11.1 | -- | 0.308 | -1.18 | -- | -- | 0.128 | 22 | 5.5 | 47520 | -- | -- |
| 81.63 | 0.422 | 11 | 1.55 | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
| 138.31 | 0.55 | 11.1 | -- | 0.335 | -- | -- | -- | 0.411 | 21.4 | -- | -- | -- | -- |
| 95.65 | 0.456 | 11.1 | -- | -- | -1.22 | -- | -- | 0.202 | -- | 5.6 | 45799 | -- | -- |
| 144.88 | 0.562 | 11.1 | -- | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.85 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 61.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 62.12 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 6 | 62.17 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 9 | 62.18 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 11 | 62.19 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 13 | 62.20 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 6 |
| 25 | 62.31 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 48 | 62.41 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 72 | 62.53 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 76 | 62.53 | wind | 7 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 77 | 62.54 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 79 | 62.58 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 80 | 62.58 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 162 | 62.98 | wind | 9 | 14400 | > th | dose dependent | sin | 12 | NA |
| 167 | 63.01 | wind | 9 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 192 | 63.10 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 227 | 63.29 | wind | 9 | 14400 | > th | dose independent | sin | 12 | NA |
| 242 | 63.36 | wind | 9 | 14400 | < th | dose independent | sin | 12 | NA |
| 344 | 63.79 | wind | 5 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 567 | 64.25 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 722 | 64.55 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 859 | 64.85 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 919 | 64.97 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 950 | 65.01 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 951 | 65.01 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 996 | 65.08 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 17 | 6 |