Os07g0204400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0204400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1483.82 | 1.81 | 8.02 | -14.2 | 0.688 | 6.43 | -2.73 | -15.9 | -2.81 | 18.5 | 25.46 | 1181 | 11.5 | -- |
| 1573.63 | 1.85 | 7.63 | -10.4 | 0.925 | 5.3 | -1.93 | -- | -2.06 | 18.2 | 25.14 | 1115 | 9.93 | -- |
| 1498.94 | 1.8 | 7.96 | -14 | 0.673 | 6.43 | -- | -16 | -2.51 | 19 | 25.98 | 1171 | 11 | -- |
| 1577.79 | 1.85 | 7.51 | -10.3 | 0.724 | 4.83 | -- | -- | -1.7 | 19.1 | 26.02 | 1140 | 9.79 | -- |
| 1514.62 | 1.81 | 7.97 | -14.1 | -- | 6.41 | -- | -16.1 | -2.66 | -- | 25.91 | 1168 | 12.6 | -- |
| 2440.88 | 2.32 | 7.49 | -9.01 | 1.16 | -- | -0.289 | -- | -1.61 | 23.8 | -- | -- | -- | -- |
| 2441.17 | 2.31 | 7.49 | -9 | 1.17 | -- | -- | -- | -1.61 | 23.9 | -- | -- | -- | -- |
| 1597.54 | 1.86 | 7.52 | -10.4 | -- | 4.8 | -- | -- | -1.8 | -- | 25.9 | 1140 | 11.9 | -- |
| 4217.26 | 3.02 | 7.2 | -- | 0.468 | 3.39 | -- | -- | -0.365 | 17 | 26.4 | 933 | 6.73 | -- |
| 2526.76 | 2.35 | 7.47 | -8.97 | -- | -- | -- | -- | -1.59 | -- | -- | -- | -- | -- |
| 4577.09 | 3.16 | 7.27 | -- | 1.06 | -- | -- | -- | -0.604 | 23.4 | -- | -- | -- | -- |
| 4227.5 | 3.03 | 7.17 | -- | -- | 3.37 | -- | -- | -0.271 | -- | 26.59 | 910 | 6.52 | -- |
| 4647.8 | 3.18 | 7.24 | -- | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1574.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 2 | 1575.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 6 | 1578.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 10 | 1580.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 19 | 1582.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 35 | 1584.95 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 94 | 1593.81 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 106 | 1596.61 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 111 | 1596.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 112 | 1597.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 142 | 1598.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 207 | 1601.45 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 232 | 1602.40 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 272 | 1603.76 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 289 | 1604.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 309 | 1604.83 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 316 | 1605.14 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 327 | 1605.55 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 344 | 1606.50 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 359 | 1607.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 361 | 1607.83 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 368 | 1608.38 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 371 | 1608.53 | wind | 9 | 43200 | > th | dose dependent | sin | 15 | NA |
| 373 | 1608.61 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 386 | 1609.37 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 392 | 1609.66 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 398 | 1609.92 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 399 | 1609.96 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 412 | 1610.25 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 417 | 1610.58 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 425 | 1610.80 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 433 | 1611.07 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 436 | 1611.17 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 441 | 1611.31 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 490 | 1612.98 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 499 | 1613.23 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 19 |
| 550 | 1615.28 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 605 | 1617.66 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 16 |
| 628 | 1618.69 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 16 |
| 690 | 1620.91 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 16 |
| 696 | 1621.12 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 697 | 1621.14 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 19 |