Os07g0204100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0204100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.63 | 0.573 | 11.1 | 0.901 | 1.05 | -0.918 | 0.193 | -4.2 | 0.594 | 23.2 | 1007 | 7548 | -- | -- |
| 164.42 | 0.597 | 11 | 1.19 | 1.03 | -1.24 | 0.218 | -- | 0.566 | 23.2 | 1006 | 7719 | -- | -- |
| 148.79 | 0.568 | 11.1 | 0.897 | 1.05 | -0.915 | -- | -4.19 | 0.594 | 23.2 | 1007 | 7554 | -- | -- |
| 164.28 | 0.597 | 11 | 1.26 | 1.04 | -1.3 | -- | -- | 0.566 | 23.2 | 1006 | 7863 | -- | -- |
| 217.82 | 0.687 | 11.1 | 0.969 | -- | -0.994 | -- | -4.02 | 0.603 | -- | 1007 | 7332 | -- | -- |
| 198.84 | 0.661 | 11 | 1.12 | 1.05 | -- | 0.164 | -- | 0.744 | 23.2 | -- | -- | -- | -- |
| 198.95 | 0.661 | 11 | 1.11 | 1.04 | -- | -- | -- | 0.743 | 23.2 | -- | -- | -- | -- |
| 232.06 | 0.709 | 11 | 1.29 | -- | -1.32 | -- | -- | 0.583 | -- | 1004 | 7395 | -- | -- |
| 205.57 | 0.668 | 11.1 | -- | 1.07 | -1.1 | -- | -- | 0.463 | 23.3 | 1005 | 7735 | -- | -- |
| 267.2 | 0.764 | 11 | 1.13 | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
| 231.38 | 0.712 | 11 | -- | 1.06 | -- | -- | -- | 0.62 | 23.3 | -- | -- | -- | -- |
| 274.8 | 0.772 | 11 | -- | -- | -1.13 | -- | -- | 0.466 | -- | 1005 | 7337 | -- | -- |
| 301.16 | 0.81 | 11 | -- | -- | -- | -- | -- | 0.627 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.04 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 2 | 137.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 3 | 137.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 4 | 137.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 139.61 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 8 | 139.64 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 11 | 139.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 14 | 140.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 15 | 140.63 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 16 | 140.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 17 | 140.73 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 22 | 140.98 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 26 | 141.41 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 27 | 141.47 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 11 |
| 38 | 141.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 63 | 142.31 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 73 | 142.46 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 103 | 142.84 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 113 | 142.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 134 | 143.21 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 135 | 143.22 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 143 | 143.35 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 147 | 143.45 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 163 | 143.63 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 175 | 143.77 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 184 | 143.78 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 216 | 143.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 235 | 144.19 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 273 | 144.42 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 322 | 144.63 | temperature | 30.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 399 | 145.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 401 | 145.09 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 404 | 145.10 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 405 | 145.11 | temperature | 30.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 419 | 145.21 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 21 |
| 437 | 145.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 463 | 145.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 491 | 145.37 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 499 | 145.41 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 510 | 145.46 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 516 | 145.48 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 557 | 145.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 562 | 145.60 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 613 | 145.70 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 616 | 145.71 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 640 | 145.84 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 646 | 145.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 647 | 145.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 651 | 145.89 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 653 | 145.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 655 | 145.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 14 |
| 679 | 145.98 | humidity | 80.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 684 | 146.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 685 | 146.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 687 | 146.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 716 | 146.09 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 733 | 146.18 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 761 | 146.30 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 784 | 146.35 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 832 | 146.52 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 862 | 146.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 896 | 146.76 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 15 |
| 909 | 146.77 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 936 | 146.84 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 938 | 146.85 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 997 | 146.85 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 22 |