Os07g0198300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os07g0198300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.92 | 0.474 | 14.1 | 2 | 1.4 | -0.688 | 1.57 | -1.18 | 0.802 | 0.631 | 77.84 | 1263 | -- | -- |
| 103.52 | 0.474 | 14.1 | 2.08 | 1.44 | -0.811 | 1.45 | -- | 0.806 | 0.584 | 75.49 | 1199 | -- | -- |
| 111.31 | 0.491 | 14 | 1.9 | 1.27 | -0.566 | -- | -1.07 | 0.852 | 0.58 | 83.65 | 1551 | -- | -- |
| 112.2 | 0.493 | 14.1 | 2.03 | 1.4 | -0.747 | -- | -- | 0.813 | 0.694 | 77.17 | 1234 | -- | -- |
| 157.4 | 0.584 | 14 | 1.91 | -- | -1.56 | -- | -1.06 | 0.879 | -- | 153.1 | 2 | -- | -- |
| 117.69 | 0.509 | 14 | 1.95 | 1.28 | -- | 1.3 | -- | 0.856 | 0.578 | -- | -- | -- | -- |
| 124.86 | 0.523 | 14 | 1.9 | 1.27 | -- | -- | -- | 0.849 | 0.661 | -- | -- | -- | -- |
| 159.28 | 0.59 | 14 | 1.93 | -- | -1.62 | -- | -- | 0.884 | -- | 357.7 | 2 | -- | -- |
| 159.51 | 0.588 | 14.1 | -- | 1.22 | -1.29 | -- | -- | 0.563 | 24 | 67.7 | 47483 | -- | -- |
| 226.43 | 0.703 | 14 | 1.95 | -- | -- | -- | -- | 0.871 | -- | -- | -- | -- | -- |
| 220.01 | 0.694 | 14.1 | -- | 1.3 | -- | -- | -- | 0.637 | 0.731 | -- | -- | -- | -- |
| 255.88 | 0.745 | 14.1 | -- | -- | -1.64 | -- | -- | 0.482 | -- | 68 | 47520 | -- | -- |
| 326.26 | 0.843 | 14.1 | -- | -- | -- | -- | -- | 0.655 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.72 | humidity | 60 | 14400 | < th | dose dependent | sin | 11 | NA |
| 2 | 99.90 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 3 | 99.99 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 5 | 100.06 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 7 | 100.09 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 9 | 100.19 | humidity | 60 | 14400 | < th | dose independent | sin | 11 | NA |
| 12 | 100.25 | humidity | 60 | 14400 | > th | dose independent | sin | 11 | NA |
| 14 | 100.34 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 16 | 100.38 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 18 | 100.42 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 19 | 100.44 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 36 | 100.72 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 76 | 101.15 | humidity | 60 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 82 | 101.22 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 110 | 101.26 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 193 | 101.28 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 195 | 101.29 | humidity | 60 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 220 | 101.31 | humidity | 60 | 14400 | < th | dose independent | sin | 3 | NA |
| 251 | 101.39 | humidity | 60 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 271 | 101.46 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 276 | 101.48 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 278 | 101.49 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 280 | 101.50 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 357 | 101.67 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 365 | 101.69 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 367 | 101.69 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 406 | 101.79 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 407 | 101.79 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 425 | 101.81 | humidity | 60 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 442 | 101.83 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 443 | 101.83 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 705 | 102.21 | humidity | 70 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 749 | 102.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 787 | 102.36 | humidity | 70 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 844 | 102.53 | humidity | 70 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 856 | 102.54 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |