Os07g0185700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0185700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23 | 0.225 | 9.01 | -0.558 | 0.464 | -0.301 | -0.419 | -1.07 | 0.259 | 4.93 | 68.99 | 715 | -- | -- |
| 24.17 | 0.229 | 8.98 | -0.48 | 0.619 | -0.271 | -0.00583 | -- | 0.315 | 5.16 | 70.35 | 1179 | -- | -- |
| 22.86 | 0.223 | 9 | -0.59 | 0.594 | -0.247 | -- | -0.806 | 0.289 | 4.95 | 71 | 1068 | -- | -- |
| 24.17 | 0.229 | 8.98 | -0.48 | 0.62 | -0.27 | -- | -- | 0.315 | 5.17 | 70.34 | 1183 | -- | -- |
| 28.37 | 0.248 | 9.01 | -0.483 | -- | -0.598 | -- | -0.369 | 0.305 | -- | 72 | 506 | -- | -- |
| 26.68 | 0.242 | 8.99 | -0.539 | 0.6 | -- | 0.088 | -- | 0.28 | 5.66 | -- | -- | -- | -- |
| 26.69 | 0.242 | 8.99 | -0.538 | 0.6 | -- | -- | -- | 0.279 | 5.63 | -- | -- | -- | -- |
| 28.64 | 0.249 | 8.99 | -0.47 | -- | -0.615 | -- | -- | 0.323 | -- | 71.46 | 499 | -- | -- |
| 30.01 | 0.255 | 8.97 | -- | 0.62 | -0.344 | -- | -- | 0.356 | 5.1 | 69.56 | 1184 | -- | -- |
| 45.41 | 0.315 | 9 | -0.519 | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
| 34.33 | 0.274 | 8.98 | -- | 0.592 | -- | -- | -- | 0.339 | 5.67 | -- | -- | -- | -- |
| 34.33 | 0.273 | 8.98 | -- | -- | -0.665 | -- | -- | 0.374 | -- | 70.32 | 520 | -- | -- |
| 52.51 | 0.338 | 8.99 | -- | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.41 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 2 | 21.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 3 | 21.64 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 4 | 21.72 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 11 | 21.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 16 | 21.85 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 33 | 21.94 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 40 | 21.97 | wind | 7.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 47 | 22.01 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 56 | 22.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 57 | 22.06 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 68 | 22.18 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 71 | 22.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 72 | 22.20 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 74 | 22.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 80 | 22.26 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 81 | 22.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 82 | 22.27 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 88 | 22.27 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 92 | 22.28 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 107 | 22.30 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 113 | 22.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 127 | 22.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 131 | 22.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 144 | 22.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 145 | 22.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 149 | 22.38 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 150 | 22.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 155 | 22.39 | humidity | 70.0 | 720 | < th | dose independent | rect. | 12 | 8 |
| 174 | 22.40 | wind | 3.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 179 | 22.41 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 187 | 22.42 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 188 | 22.42 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 189 | 22.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 192 | 22.43 | humidity | 70.0 | 720 | < th | dose independent | sin | 17 | NA |
| 193 | 22.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 202 | 22.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 208 | 22.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 212 | 22.45 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 217 | 22.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 228 | 22.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 232 | 22.47 | wind | 3.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 269 | 22.48 | wind | 3.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 277 | 22.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 281 | 22.49 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 297 | 22.50 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 305 | 22.50 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 308 | 22.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 314 | 22.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 315 | 22.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 319 | 22.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 320 | 22.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 322 | 22.52 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 343 | 22.53 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 367 | 22.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 379 | 22.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 381 | 22.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 386 | 22.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 412 | 22.58 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 15 |
| 423 | 22.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 424 | 22.59 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 3 |
| 438 | 22.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 448 | 22.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 454 | 22.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 487 | 22.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 534 | 22.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 537 | 22.68 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 547 | 22.69 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 553 | 22.70 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 555 | 22.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 572 | 22.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 573 | 22.71 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 586 | 22.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 590 | 22.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 605 | 22.72 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 617 | 22.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 634 | 22.73 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 635 | 22.74 | wind | 9.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 659 | 22.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 661 | 22.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 663 | 22.75 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 677 | 22.75 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 679 | 22.75 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 6 |
| 697 | 22.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 698 | 22.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 741 | 22.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 745 | 22.79 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 771 | 22.80 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 802 | 22.81 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 820 | 22.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 829 | 22.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 871 | 22.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 18 |
| 873 | 22.85 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 891 | 22.85 | humidity | 80.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 905 | 22.86 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 907 | 22.86 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 929 | 22.86 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 937 | 22.86 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 13 | 19 |
| 943 | 22.87 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 953 | 22.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 959 | 22.87 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 960 | 22.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 966 | 22.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 12 |
| 989 | 22.88 | humidity | 70.0 | 720 | > th | dose independent | rect. | 2 | 18 |