BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0185700 Os07g0185700|AK070572
         (602 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48520.1  | chr5:19661407-19666147 FORWARD LENGTH=618          532   e-151

>AT5G48520.1 | chr5:19661407-19666147 FORWARD LENGTH=618
          Length = 617

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/589 (47%), Positives = 394/589 (66%), Gaps = 16/589 (2%)

Query: 27  EWPFLQGDDARRLLAWVSSRLRPANVLSATDLALYXXXXXXXXXXXXXXXXFAFDSISAF 86
           EWPF Q DDAR +L W+ S LRP+NVLS  +L+LY                 A+DSISAF
Sbjct: 27  EWPF-QYDDARPILDWICSSLRPSNVLSLAELSLYEQFQRDGKLLEGDDLDQAYDSISAF 85

Query: 87  SETGENQEDTFLTEESLEHIRDSKLTLRAEVSDLERQLASLEWQLDMLTAQATTITQGKK 146
           S    NQE  F  EES++ +RD+ L  +AE  +L+RQL  L+ Q D+LT Q++ + QG++
Sbjct: 86  SSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQSSALIQGRR 145

Query: 147 SRVSAKTNPNIQISRLDEKLAKRSLEMNSLLGKLAATTQELSYYHSEADIGIYLSYSDFQ 206
           +RV+A +  + QI+ +++ L+ R+L+MN +LG+LA+T+QEL++YHS  + GIYL+YSDF 
Sbjct: 146 ARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGIYLAYSDFH 205

Query: 207 SYIIQNLACIKELNRWFSKKFEKGPLQFVAKEDMSRG-------------DYEGSHHLSV 253
           +Y+  + AC KELN+WF+K+ + GP + VA+E  S+              D E S H  V
Sbjct: 206 AYLAGDSACTKELNQWFAKQLDTGPYRLVAEEGKSKCSWVSLDDTSNMLRDLEKSQHQRV 265

Query: 254 -ELKRINSIFARSKRQYIEAQAEYAKEEAILSTLRTQLASQQSLVHQDVHSLRRRNSEFA 312
            EL+R+ SIF  S+RQ+IEAQ E AK++AIL TL++Q+ S ++ +H D+HSLRR++++  
Sbjct: 266 AELQRLRSIFGTSERQWIEAQVENAKQQAILLTLKSQVTSVEAHIHFDLHSLRRKHADLV 325

Query: 313 EELRDLSLQVKRCLSEIITSLCADLAQLEGANILQGDHNLKVLRQECYISQQKRFINYLV 372
           EE+  L  + ++ LSE I  LC +LAQL+   ILQGD++LKV+RQE YIS+QK FIN+LV
Sbjct: 326 EEISTLYQKEEKLLSETIPELCWELAQLQDTYILQGDYDLKVMRQELYISKQKVFINHLV 385

Query: 373 NQLAAHQFLKIACQIEGRAKMSSAYSLLKAAAMELQGYFSVVDGRLDRYHLIGQAASVML 432
           NQLA HQFLK+ACQ+E +  M  A+SLLK    ELQGY S    R+ R   + QAAS + 
Sbjct: 386 NQLARHQFLKLACQLE-KKNMLGAFSLLKVIESELQGYLSATRSRVGRCSALIQAASDVQ 444

Query: 433 EEGSIDDRDTFLHAVRDILSTHSGAQAMTPSYVSAYGLVEQISDXXXXXXXXXXXXXXVL 492
           E+G++DDRD+FLH VRD+LS HS  QA   +YVSA  +++QI                 L
Sbjct: 445 EQGAVDDRDSFLHGVRDLLSIHSNTQAGLSTYVSAPAIIQQIVALQSDLSSLQSDLENSL 504

Query: 493 PRERKRCIDELCRMIQTLEQILSVPFTYVQPTLTPWPVAQSLEELEIINQQVSACVNEVT 552
           P +R RCI+ELC  IQ L+Q+L    T  QP LTPWP+ + L+E+  IN ++S  V EVT
Sbjct: 505 PDDRNRCINELCTHIQNLQQLLFASSTTAQPILTPWPLMKELDEMGKINSKLSTAVEEVT 564

Query: 553 MARDKKAKMLQQPSRNVQQERRVFVDFFCHPGRLENQVREMSSHVRALQ 601
           +    K ++++  +++V+ +RRVFVDFFC+P RL NQVRE+++ VRA Q
Sbjct: 565 LEHRNKREIVKHHAKDVELQRRVFVDFFCNPERLRNQVRELNALVRARQ 613



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.130    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,113,328
Number of extensions: 364345
Number of successful extensions: 1333
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1329
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 498
Effective length of database: 8,255,305
Effective search space: 4111141890
Effective search space used: 4111141890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)