Os07g0179200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0179200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.41 | 0.306 | 10.6 | 0.0963 | 0.118 | 1.03 | 0.488 | 0.671 | -0.0571 | 19.9 | 19 | 12 | -- | -- |
| 42.79 | 0.305 | 10.6 | -0.0059 | 0.123 | 1.02 | 0.454 | -- | -0.0795 | 18.8 | 19.59 | 18 | -- | -- |
| 43 | 0.305 | 10.6 | 0.0844 | 0.125 | 1 | -- | 0.585 | -0.0538 | 18.5 | 18.9 | 12 | -- | -- |
| 43.33 | 0.307 | 10.6 | -0.0164 | 0.127 | 1.01 | -- | -- | -0.0812 | 18.4 | 19.46 | 18 | -- | -- |
| 43.25 | 0.306 | 10.6 | 0.0562 | -- | 1.06 | -- | 0.597 | -0.0578 | -- | 18.7 | 99 | -- | -- |
| 57.76 | 0.356 | 10.5 | 0.196 | 0.448 | -- | 0.414 | -- | 0.0913 | 15.6 | -- | -- | -- | -- |
| 58.26 | 0.357 | 10.5 | 0.202 | 0.449 | -- | -- | -- | 0.0936 | 15.4 | -- | -- | -- | -- |
| 43.52 | 0.307 | 10.6 | -0.0372 | -- | 1.06 | -- | -- | -0.0896 | -- | 19.43 | 91 | -- | -- |
| 43.34 | 0.307 | 10.6 | -- | 0.128 | 1.01 | -- | -- | -0.0781 | 18.3 | 19.54 | 18 | -- | -- |
| 69.58 | 0.39 | 10.5 | 0.183 | -- | -- | -- | -- | 0.0817 | -- | -- | -- | -- | -- |
| 59.34 | 0.36 | 10.5 | -- | 0.445 | -- | -- | -- | 0.0711 | 15.4 | -- | -- | -- | -- |
| 43.56 | 0.307 | 10.6 | -- | -- | 1.05 | -- | -- | -0.0848 | -- | 19.5 | 91 | -- | -- |
| 70.46 | 0.392 | 10.5 | -- | -- | -- | -- | -- | 0.0614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 14 | 41.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 16 | 41.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 34 | 41.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 51 | 42.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 54 | 42.20 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 60 | 42.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 62 | 42.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 63 | 42.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 90 | 42.49 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 94 | 42.54 | temperature | 10 | 90 | > th | dose dependent | sin | 2 | NA |
| 99 | 42.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 124 | 42.72 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 169 | 42.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 178 | 42.98 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 209 | 43.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 220 | 43.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 244 | 43.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 252 | 43.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 261 | 43.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 293 | 43.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 297 | 43.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 304 | 43.52 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 365 | 43.73 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 371 | 43.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 374 | 43.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 401 | 43.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 403 | 43.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 413 | 43.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 440 | 43.93 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 444 | 43.94 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 510 | 44.09 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 525 | 44.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 826 | 44.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 920 | 44.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 940 | 44.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 985 | 44.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |