Os07g0167000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to EIF3e.
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Os07g0167000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to EIF3e.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.78 | 0.296 | 7.89 | -0.841 | 0.128 | 0.0445 | -0.335 | -1.85 | -0.108 | 6.46 | 68 | 5726 | -- | -- |
| 44.68 | 0.311 | 7.9 | -0.769 | 0.13 | 0.167 | -0.355 | -- | -0.113 | 6.44 | 64.21 | 10881 | -- | -- |
| 40.06 | 0.295 | 7.89 | -0.846 | 0.127 | 0.0414 | -- | -1.86 | -0.107 | 6.26 | 67.88 | 5704 | -- | -- |
| 44.96 | 0.312 | 7.9 | -0.769 | 0.129 | 0.165 | -- | -- | -0.11 | 6.43 | 62.34 | 10897 | -- | -- |
| 40.88 | 0.298 | 7.89 | -0.843 | -- | 0.0479 | -- | -1.86 | -0.105 | -- | 67.86 | 5695 | -- | -- |
| 45.1 | 0.315 | 7.9 | -0.812 | 0.126 | -- | -0.343 | -- | -0.114 | 6.66 | -- | -- | -- | -- |
| 45.39 | 0.316 | 7.9 | -0.817 | 0.125 | -- | -- | -- | -0.113 | 6.66 | -- | -- | -- | -- |
| 45.72 | 0.315 | 7.9 | -0.776 | -- | 0.168 | -- | -- | -0.107 | -- | 62.19 | 11470 | -- | -- |
| 50.46 | 0.331 | 7.87 | -- | 0.118 | 0.703 | -- | -- | 0.0109 | 6.78 | 64.88 | 47520 | -- | -- |
| 46.21 | 0.318 | 7.9 | -0.814 | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
| 63 | 0.371 | 7.88 | -- | 0.115 | -- | -- | -- | -0.022 | 7.08 | -- | -- | -- | -- |
| 51.19 | 0.333 | 7.87 | -- | -- | 0.702 | -- | -- | 0.0128 | -- | 64.42 | 47520 | -- | -- |
| 63.7 | 0.373 | 7.88 | -- | -- | -- | -- | -- | -0.0201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 2 | 38.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 6 | 38.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 21 | 38.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 23 | 38.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 26 | 38.32 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 28 | 38.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 47 | 38.47 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 69 | 38.59 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 98 | 38.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 118 | 38.76 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 150 | 38.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 154 | 38.85 | humidity | 90.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 167 | 38.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 215 | 38.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 227 | 39.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 239 | 39.04 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 258 | 39.07 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 309 | 39.16 | humidity | 90.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 324 | 39.18 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 353 | 39.23 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 365 | 39.25 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 416 | 39.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 420 | 39.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 425 | 39.32 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 457 | 39.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 465 | 39.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 475 | 39.38 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 486 | 39.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 491 | 39.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 502 | 39.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 513 | 39.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 565 | 39.46 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 635 | 39.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 642 | 39.53 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 683 | 39.56 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 684 | 39.56 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 685 | 39.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 716 | 39.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 718 | 39.59 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 721 | 39.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 735 | 39.61 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 738 | 39.61 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 753 | 39.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 770 | 39.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 795 | 39.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 796 | 39.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 807 | 39.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 816 | 39.65 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 13 |
| 819 | 39.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 887 | 39.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 929 | 39.72 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 960 | 39.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |