Os07g0165700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0165700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.38 | 0.475 | 7.17 | 0.805 | 0.966 | 2.87 | -1.82 | -0.958 | 0.656 | 13.7 | 8.297 | 234 | 6.13 | 20.4 |
| 102.88 | 0.472 | 7.17 | 0.868 | 0.978 | 2.83 | -2.04 | -- | 0.663 | 13.9 | 8.054 | 226 | 6.15 | 20.5 |
| 113.47 | 0.496 | 7.19 | 0.661 | 0.938 | 2.98 | -- | -2.29 | 0.654 | 13.1 | 8.032 | 234 | 6.25 | 20 |
| 118.81 | 0.508 | 7.17 | 0.842 | 1 | 2.83 | -- | -- | 0.668 | 13.7 | 7.23 | 235 | 6.03 | 20.7 |
| 151.35 | 0.573 | 7.22 | 0.495 | -- | 3.46 | -- | -1.87 | 0.51 | -- | 11.28 | 172 | 6.43 | 20.1 |
| 190.99 | 0.648 | 7.15 | 1.25 | 2.33 | -- | -1.69 | -- | 0.867 | 15.9 | -- | -- | -- | -- |
| 199.2 | 0.661 | 7.15 | 1.23 | 2.33 | -- | -- | -- | 0.857 | 16 | -- | -- | -- | -- |
| 158.05 | 0.586 | 7.2 | 0.685 | -- | 3.32 | -- | -- | 0.576 | -- | 12.36 | 167 | 6.6 | 19.9 |
| 135.47 | 0.542 | 7.19 | -- | 0.911 | 3.09 | -- | -- | 0.562 | 13.2 | 8.405 | 247 | 5.97 | 20.7 |
| 494.78 | 1.04 | 7.15 | 1.13 | -- | -- | -- | -- | 0.795 | -- | -- | -- | -- | -- |
| 238.98 | 0.723 | 7.18 | -- | 2.3 | -- | -- | -- | 0.721 | 16 | -- | -- | -- | -- |
| 169.49 | 0.606 | 7.22 | -- | -- | 3.38 | -- | -- | 0.481 | -- | 13.74 | 160 | 6.7 | 19.8 |
| 528.66 | 1.07 | 7.17 | -- | -- | -- | -- | -- | 0.67 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 8 | 112.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 12 | 113.92 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 16 | 114.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 18 | 115.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 26 | 116.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 30 | 116.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 61 | 120.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 108 | 122.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 175 | 125.90 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 17 |
| 187 | 126.37 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 189 | 126.59 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 242 | 129.56 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 248 | 129.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 270 | 130.64 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 22 |
| 271 | 130.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 283 | 131.10 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 349 | 132.84 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 22 |
| 362 | 133.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 375 | 133.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 391 | 133.52 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 419 | 134.35 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 20 |
| 458 | 135.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 508 | 135.91 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 524 | 136.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 533 | 136.55 | temperature | 20 | 90 | > th | dose dependent | sin | 6 | NA |
| 565 | 136.98 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 583 | 137.20 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 596 | 137.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 600 | 137.38 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 633 | 137.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 637 | 137.83 | radiation | 1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 698 | 138.58 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 22 |
| 705 | 138.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 752 | 139.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 774 | 139.46 | radiation | 1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 815 | 139.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 820 | 139.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 831 | 139.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 895 | 140.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 938 | 140.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 946 | 140.96 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 23 |
| 965 | 141.16 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |
| 977 | 141.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |