Os07g0151800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0151800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.68 | 0.411 | 8.83 | 2.03 | 0.0682 | -1.07 | -0.661 | 1.49 | 0.515 | 4.96 | 24.5 | 1234 | -- | -- |
| 77.57 | 0.41 | 8.87 | 1.69 | 0.052 | -0.95 | -0.694 | -- | 0.443 | 5.87 | 24.03 | 1220 | -- | -- |
| 77.64 | 0.41 | 8.83 | 2.02 | 0.0876 | -1.11 | -- | 1.48 | 0.519 | 1.7 | 24.5 | 1193 | -- | -- |
| 78.43 | 0.412 | 8.87 | 1.64 | 0.0647 | -0.934 | -- | -- | 0.434 | 5.02 | 24.1 | 1237 | -- | -- |
| 78 | 0.411 | 8.83 | 2.01 | -- | -1.06 | -- | 1.44 | 0.51 | -- | 24.58 | 1223 | -- | -- |
| 107.64 | 0.486 | 8.91 | 1.34 | 0.0559 | -- | 0.722 | -- | 0.287 | 16.4 | -- | -- | -- | -- |
| 108.46 | 0.488 | 8.9 | 1.35 | 0.112 | -- | -- | -- | 0.291 | 12.3 | -- | -- | -- | -- |
| 78.66 | 0.413 | 8.87 | 1.65 | -- | -0.926 | -- | -- | 0.434 | -- | 24.08 | 1235 | -- | -- |
| 142.07 | 0.555 | 8.96 | -- | 0.0494 | -0.532 | -- | -- | 0.0258 | 7.43 | 31.56 | 1282 | -- | -- |
| 109.25 | 0.488 | 8.9 | 1.34 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 156.33 | 0.585 | 8.93 | -- | 0.0948 | -- | -- | -- | 0.141 | 11.6 | -- | -- | -- | -- |
| 142.19 | 0.555 | 8.96 | -- | -- | -0.533 | -- | -- | 0.0264 | -- | 31.56 | 1273 | -- | -- |
| 156.9 | 0.585 | 8.94 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.73 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 77.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 3 | 77.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 17 | 78.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 30 | 78.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 20 |
| 35 | 78.28 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 37 | 78.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 21 |
| 40 | 78.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 46 | 78.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 47 | 78.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 66 | 78.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 71 | 78.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 83 | 78.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 91 | 78.36 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 161 | 78.51 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 162 | 78.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 265 | 78.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 285 | 79.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 313 | 79.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 370 | 79.34 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 395 | 79.44 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 404 | 79.50 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 433 | 79.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 455 | 79.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 457 | 79.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 467 | 79.82 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 559 | 80.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 576 | 80.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 583 | 80.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 592 | 80.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 600 | 80.45 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 605 | 80.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 620 | 80.50 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 657 | 80.52 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 659 | 80.52 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 715 | 80.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 837 | 80.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 877 | 80.60 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 885 | 80.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 927 | 80.64 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 930 | 80.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 934 | 80.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 936 | 80.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 937 | 80.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 938 | 80.66 | temperature | 30 | 1440 | > th | dose independent | sin | 20 | NA |
| 947 | 80.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 952 | 80.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 954 | 80.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 970 | 80.70 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |