Os07g0148900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Photosystem I protein-like protein.
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Os07g0148900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Photosystem I protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.26 | 0.466 | 16.1 | -2.33 | 1.84 | 1.46 | 2.54 | -4.69 | -0.503 | 7.81 | 30.09 | 372 | -- | -- |
| 99.64 | 0.465 | 16.1 | -1.93 | 1.86 | 0.98 | 2.63 | -- | -0.49 | 7.71 | 29.7 | 370 | -- | -- |
| 115.64 | 0.501 | 16.1 | -2.23 | 1.81 | 1.25 | -- | -4.28 | -0.537 | 7.83 | 29.84 | 371 | -- | -- |
| 118.96 | 0.508 | 16.1 | -1.81 | 1.84 | 0.799 | -- | -- | -0.554 | 7.73 | 29.58 | 368 | -- | -- |
| 258.67 | 0.749 | 16.2 | -2.32 | -- | 1.04 | -- | -4.12 | -0.427 | -- | 32.9 | 1576 | -- | -- |
| 118.11 | 0.509 | 16.1 | -1.79 | 1.56 | -- | 2.09 | -- | -0.523 | 8.25 | -- | -- | -- | -- |
| 131.58 | 0.537 | 16.1 | -1.73 | 1.56 | -- | -- | -- | -0.524 | 8.29 | -- | -- | -- | -- |
| 252.03 | 0.739 | 16.1 | -1.88 | -- | 0.498 | -- | -- | -0.454 | -- | 30.8 | 5778 | -- | -- |
| 205.45 | 0.668 | 16 | -- | 1.66 | 0.519 | -- | -- | -0.271 | 8.16 | 30.67 | 365 | -- | -- |
| 265.6 | 0.762 | 16.1 | -1.72 | -- | -- | -- | -- | -0.507 | -- | -- | -- | -- | -- |
| 210.24 | 0.678 | 16 | -- | 1.55 | -- | -- | -- | -0.331 | 8.38 | -- | -- | -- | -- |
| 339.2 | 0.858 | 16.1 | -- | -- | 0.297 | -- | -- | -0.318 | -- | 32.5 | 7168 | -- | -- |
| 343.39 | 0.865 | 16.1 | -- | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.35 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 3 | 89.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 28 | 91.63 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 46 | 92.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 52 | 93.35 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 66 | 93.92 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 88 | 94.97 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 98 | 95.07 | humidity | 90.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 100 | 95.13 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 105 | 95.30 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 108 | 95.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 109 | 95.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 110 | 95.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 114 | 95.50 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 118 | 95.55 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 126 | 95.71 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 139 | 95.95 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 140 | 95.96 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 142 | 95.98 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 144 | 96.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 150 | 96.05 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 155 | 96.13 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 157 | 96.18 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 158 | 96.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 159 | 96.18 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 162 | 96.18 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 168 | 96.18 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 169 | 96.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 188 | 96.40 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 198 | 96.50 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 202 | 96.52 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 235 | 96.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 239 | 96.86 | wind | 3.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 256 | 97.00 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 262 | 97.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 2 |
| 263 | 97.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 270 | 97.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 278 | 97.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 279 | 97.14 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 280 | 97.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 286 | 97.21 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 288 | 97.22 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 304 | 97.35 | wind | 7.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 309 | 97.37 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 311 | 97.40 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 313 | 97.42 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 314 | 97.42 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 315 | 97.42 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 319 | 97.42 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 324 | 97.42 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 326 | 97.42 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 327 | 97.42 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 334 | 97.44 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 7 |
| 335 | 97.44 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 347 | 97.53 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 352 | 97.62 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 354 | 97.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 363 | 97.68 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 364 | 97.69 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 388 | 97.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 390 | 97.74 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 392 | 97.74 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 394 | 97.74 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 398 | 97.74 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 399 | 97.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 422 | 97.91 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 429 | 97.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 434 | 97.94 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 437 | 97.94 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 438 | 97.95 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 459 | 98.07 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 460 | 98.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 23 |
| 508 | 98.31 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 531 | 98.39 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 534 | 98.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 544 | 98.44 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 546 | 98.45 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 573 | 98.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 574 | 98.60 | wind | 5.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 578 | 98.61 | temperature | 25.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 580 | 98.61 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 587 | 98.65 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 3 | 17 |
| 596 | 98.69 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 606 | 98.72 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 615 | 98.75 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 657 | 98.88 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 686 | 98.98 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 692 | 99.00 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 701 | 99.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 704 | 99.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 708 | 99.02 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 714 | 99.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 715 | 99.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 735 | 99.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 754 | 99.07 | temperature | 30.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 761 | 99.09 | humidity | 80.0 | 10 | > th | dose independent | rect. | 18 | 9 |
| 766 | 99.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 22 |
| 768 | 99.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 773 | 99.14 | radiation | 20.0 | 90 | < th | dose independent | rect. | 12 | 7 |
| 790 | 99.18 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 828 | 99.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 839 | 99.34 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 849 | 99.37 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 13 | 7 |
| 954 | 99.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 967 | 99.66 | wind | 5.0 | 30 | < th | dose independent | rect. | 14 | 6 |