Os07g0148800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0148800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 374.51 | 0.909 | 9.63 | -5.67 | 1.07 | 2.34 | 0.223 | -6.25 | -0.183 | 19.7 | 27.56 | 1234 | -- | -- |
| 380 | 0.908 | 9.46 | -4.28 | 1.09 | 1.65 | 0.00891 | -- | 0.0675 | 19.6 | 27.8 | 1234 | -- | -- |
| 374.46 | 0.901 | 9.62 | -5.62 | 1.08 | 2.33 | -- | -6.18 | -0.145 | 19.7 | 27.8 | 1243 | -- | -- |
| 379.93 | 0.908 | 9.46 | -4.3 | 1.1 | 1.65 | -- | -- | 0.064 | 19.7 | 27.8 | 1234 | -- | -- |
| 418.89 | 0.953 | 9.59 | -5.37 | -- | 2.73 | -- | -5.3 | -0.327 | -- | 26 | 947 | -- | -- |
| 498.18 | 1.05 | 9.48 | -3.8 | 1.16 | -- | 0.667 | -- | -0.0188 | 20.8 | -- | -- | -- | -- |
| 499.51 | 1.05 | 9.48 | -3.82 | 1.17 | -- | -- | -- | -0.0177 | 20.6 | -- | -- | -- | -- |
| 425.4 | 0.961 | 9.48 | -4.39 | -- | 2.24 | -- | -- | -0.137 | -- | 25.78 | 939 | -- | -- |
| 837.35 | 1.35 | 9.32 | -- | 1.14 | 1.02 | -- | -- | 0.631 | 19.9 | 31.27 | 1163 | -- | -- |
| 576.34 | 1.12 | 9.45 | -3.83 | -- | -- | -- | -- | -0.0281 | -- | -- | -- | -- | -- |
| 885.05 | 1.39 | 9.39 | -- | 1.18 | -- | -- | -- | 0.408 | 20.4 | -- | -- | -- | -- |
| 903.56 | 1.4 | 9.34 | -- | -- | 1.34 | -- | -- | 0.478 | -- | 27.6 | 931 | -- | -- |
| 962.96 | 1.45 | 9.36 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 378.15 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 3 | 378.68 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 5 | 379.35 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 379.79 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 20 | 379.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 24 | 380.07 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 26 | 380.24 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 41 | 380.53 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 43 | 380.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 51 | 381.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 53 | 381.03 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 61 | 381.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 65 | 381.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 98 | 381.98 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 181 | 382.65 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 250 | 383.21 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 252 | 383.25 | temperature | 30 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 266 | 383.26 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 399 | 383.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 501 | 384.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 510 | 384.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 517 | 385.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 519 | 385.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 525 | 385.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 556 | 385.09 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 557 | 385.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 561 | 385.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 562 | 385.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 577 | 385.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 592 | 385.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 593 | 385.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 621 | 385.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 650 | 385.27 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 683 | 385.41 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 799 | 385.67 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 818 | 385.76 | wind | 5 | 43200 | > th | dose dependent | sin | 2 | NA |
| 833 | 385.96 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 837 | 386.02 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 844 | 386.09 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 878 | 386.18 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 882 | 386.25 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 4 |
| 894 | 386.33 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 985 | 386.81 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 1 |