Os07g0143200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Basic helix-loop-helix dimerisation region bHLH domain containing protein.
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Os07g0143200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Basic helix-loop-helix dimerisation region bHLH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.35 | 0.496 | 11 | 0.208 | 1.73 | 0.933 | 0.054 | 0.283 | 0.359 | 23.7 | 70 | 1446 | -- | -- |
| 111.52 | 0.492 | 11 | 0.253 | 1.73 | 0.951 | 0.0622 | -- | 0.373 | 23.7 | 70.28 | 1445 | -- | -- |
| 111.36 | 0.491 | 11 | 0.206 | 1.73 | 0.935 | -- | 0.287 | 0.358 | 23.7 | 70 | 1448 | -- | -- |
| 111.54 | 0.492 | 11 | 0.25 | 1.73 | 0.95 | -- | -- | 0.372 | 23.7 | 70.28 | 1445 | -- | -- |
| 223.81 | 0.701 | 11 | 0.176 | -- | 1.05 | -- | -0.137 | 0.267 | -- | 73.02 | 1589 | -- | -- |
| 146.22 | 0.567 | 11 | 0.0343 | 1.73 | -- | -0.12 | -- | 0.235 | 23.6 | -- | -- | -- | -- |
| 146.29 | 0.566 | 11 | 0.0392 | 1.73 | -- | -- | -- | 0.236 | 23.6 | -- | -- | -- | -- |
| 223.92 | 0.7 | 11 | 0.172 | -- | 1.05 | -- | -- | 0.265 | -- | 73.39 | 1591 | -- | -- |
| 112.9 | 0.495 | 11 | -- | 1.75 | 0.914 | -- | -- | 0.357 | 23.7 | 71.15 | 1417 | -- | -- |
| 335.25 | 0.856 | 11 | 0.0879 | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
| 146.33 | 0.566 | 11 | -- | 1.73 | -- | -- | -- | 0.231 | 23.6 | -- | -- | -- | -- |
| 224.7 | 0.7 | 11 | -- | -- | 1.04 | -- | -- | 0.246 | -- | 73.39 | 1591 | -- | -- |
| 335.46 | 0.855 | 11 | -- | -- | -- | -- | -- | 0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 2 | 107.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 4 | 107.34 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 15 | 107.56 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 23 | 108.00 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 42 | 108.40 | humidity | 70 | 1440 | > th | dose independent | sin | 5 | NA |
| 46 | 108.44 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 56 | 108.47 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 59 | 108.50 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 72 | 108.65 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 75 | 108.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 78 | 108.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 82 | 108.81 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 91 | 108.88 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 102 | 109.01 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 147 | 109.36 | humidity | 80 | 1440 | < th | dose dependent | sin | 6 | NA |
| 306 | 110.23 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 376 | 110.69 | humidity | 60 | 1440 | > th | dose dependent | sin | 1 | NA |
| 426 | 111.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 571 | 111.37 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 627 | 111.53 | humidity | 60 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 633 | 111.55 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 15 |
| 700 | 111.76 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 785 | 112.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 992 | 112.58 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |