Os07g0136300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0136300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 291.41 | 0.802 | 4.32 | 3.28 | 0.935 | 5.41 | 1.97 | -0.145 | 0.128 | 15.1 | 25.51 | 3428 | -- | -- |
| 291.38 | 0.795 | 4.32 | 3.27 | 0.934 | 5.44 | 1.97 | -- | 0.127 | 15.1 | 25.29 | 3430 | -- | -- |
| 304.15 | 0.812 | 4.32 | 3.28 | 0.947 | 5.43 | -- | 0.0849 | 0.129 | 15.1 | 25.32 | 3421 | -- | -- |
| 304.16 | 0.812 | 4.31 | 3.29 | 0.946 | 5.42 | -- | -- | 0.132 | 15.1 | 25.35 | 3421 | -- | -- |
| 321.51 | 0.835 | 4.3 | 3.08 | -- | 5.08 | -- | -0.605 | 0.0962 | -- | 27.88 | 2596 | -- | -- |
| 761.56 | 1.29 | 4.63 | 0.798 | 1.08 | -- | 1.67 | -- | -1.26 | 14.5 | -- | -- | -- | -- |
| 771.67 | 1.3 | 4.62 | 0.843 | 1.09 | -- | -- | -- | -1.25 | 14.5 | -- | -- | -- | -- |
| 322.09 | 0.836 | 4.32 | 2.95 | -- | 5.13 | -- | -- | 0.0749 | -- | 27.64 | 2591 | -- | -- |
| 473.16 | 1.01 | 4.49 | -- | 0.869 | 4.03 | -- | -- | -0.695 | 14.8 | 44.42 | 1482 | -- | -- |
| 841.16 | 1.36 | 4.63 | 0.797 | -- | -- | -- | -- | -1.28 | -- | -- | -- | -- | -- |
| 790.38 | 1.32 | 4.64 | -- | 1.07 | -- | -- | -- | -1.34 | 14.4 | -- | -- | -- | -- |
| 500.98 | 1.04 | 4.49 | -- | -- | 3.8 | -- | -- | -0.664 | -- | 31.07 | 2513 | -- | -- |
| 857.9 | 1.37 | 4.65 | -- | -- | -- | -- | -- | -1.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 293.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 13 | 295.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 14 |
| 17 | 295.41 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 21 | 295.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 30 | 295.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 43 | 296.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 48 | 296.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 71 | 297.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 73 | 297.06 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 83 | 297.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 102 | 297.93 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 122 | 298.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 123 | 298.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 184 | 299.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 21 |
| 214 | 300.57 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 21 |
| 228 | 300.71 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 21 |
| 292 | 301.41 | temperature | 25 | 4320 | < th | dose dependent | sin | 16 | NA |
| 298 | 301.50 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 319 | 301.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 23 |
| 824 | 307.11 | temperature | 25 | 4320 | < th | dose dependent | sin | 4 | NA |
| 971 | 308.10 | temperature | 15 | 4320 | > th | dose dependent | rect. | 10 | 21 |