Os07g0119600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0119600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.38 | 0.539 | 4.54 | 0.742 | 1.43 | -1.55 | 0.135 | -2.66 | 0.942 | 2.03 | 19.4 | 4794 | -- | -- |
| 137.83 | 0.547 | 4.62 | 0.626 | 1.4 | -0.732 | -0.258 | -- | 0.851 | 2.19 | 21.7 | 5092 | -- | -- |
| 130.15 | 0.531 | 4.54 | 0.663 | 1.45 | -1.54 | -- | -2.6 | 0.925 | 1.97 | 19.4 | 6095 | -- | -- |
| 134.8 | 0.541 | 4.63 | 0.637 | 1.43 | -0.719 | -- | -- | 0.864 | 2.03 | 21.8 | 3258 | -- | -- |
| 250.84 | 0.738 | 4.51 | 0.767 | -- | -1.58 | -- | -2.68 | 0.976 | -- | 19.38 | 5326 | -- | -- |
| 150.14 | 0.574 | 4.59 | 1.02 | 1.45 | -- | 0.162 | -- | 1.1 | 1.99 | -- | -- | -- | -- |
| 150.25 | 0.574 | 4.59 | 1.01 | 1.45 | -- | -- | -- | 1.1 | 1.99 | -- | -- | -- | -- |
| 237.01 | 0.717 | 4.65 | 0.707 | -- | -1.02 | -- | -- | 0.81 | -- | 24.1 | 2479 | -- | -- |
| 141.77 | 0.555 | 4.67 | -- | 1.52 | -0.955 | -- | -- | 0.779 | 1.98 | 21.04 | 7785 | -- | -- |
| 276.59 | 0.777 | 4.57 | 1.07 | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
| 177.36 | 0.623 | 4.61 | -- | 1.47 | -- | -- | -- | 0.984 | 2.01 | -- | -- | -- | -- |
| 248.11 | 0.734 | 4.63 | -- | -- | -1.15 | -- | -- | 0.783 | -- | 24.2 | 2479 | -- | -- |
| 307.04 | 0.818 | 4.6 | -- | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 4 | 130.54 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 13 | 131.24 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 14 | 131.26 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 16 | 131.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 17 | 131.37 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 22 | 131.42 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 29 | 131.50 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 46 | 131.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 53 | 131.73 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 86 | 131.92 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 117 | 132.02 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 118 | 132.02 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 119 | 132.02 | wind | 1 | 14400 | < th | dose dependent | sin | 8 | NA |
| 120 | 132.02 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 124 | 132.03 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 133 | 132.05 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 137 | 132.05 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 142 | 132.07 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 145 | 132.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 15 |
| 160 | 132.13 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 164 | 132.14 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 171 | 132.16 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 9 |
| 180 | 132.19 | wind | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 185 | 132.19 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 191 | 132.21 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 192 | 132.21 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 193 | 132.21 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 208 | 132.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 261 | 132.33 | wind | 1 | 14400 | < th | dose independent | rect. | 12 | 20 |
| 266 | 132.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 285 | 132.38 | wind | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 290 | 132.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 319 | 132.43 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 326 | 132.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 381 | 132.53 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 385 | 132.53 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 386 | 132.54 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 397 | 132.56 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 401 | 132.56 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 437 | 132.65 | wind | 1 | 14400 | > th | dose independent | no | NA | NA |
| 439 | 132.65 | wind | 1 | 14400 | < th | dose independent | no | NA | NA |
| 444 | 132.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 454 | 132.68 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 478 | 132.72 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 500 | 132.75 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 513 | 132.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 521 | 132.80 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 527 | 132.81 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 16 |
| 546 | 132.84 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 594 | 132.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 598 | 132.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 604 | 132.94 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 608 | 132.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 611 | 132.95 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 643 | 132.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 672 | 133.03 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 674 | 133.04 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 692 | 133.06 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 706 | 133.10 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 720 | 133.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 740 | 133.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 797 | 133.24 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 802 | 133.25 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 862 | 133.32 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 869 | 133.33 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 889 | 133.36 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 910 | 133.38 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 21 |
| 987 | 133.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 989 | 133.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 3 |