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Os07g0119100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.88 (0.046) R2 : 0.567
β1 : 3.68 (0.171) R2dD : 0.474 R2D : 0.324
β2 : 0.64 (0.11) R2dC : 0.0337 R2C : 0.0516
β3 : -1.62 (0.124) R2dE : 0.18 R2E : 0.0697
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.11 (0.0988) R2dN8 : 0.0015 R2N8 : -0.00261
σ : 0.856
deviance : 337.62
__
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C
peak time of C : 11
E
wheather : temperature
threshold : 28.81
memory length : 1256
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
334.86 0.86 8.72 5.21 0.685 -2.56 0.288 8.76 0.00842 11.3 29.9 1348 -- --
345.69 0.866 8.82 4.05 0.785 -1.64 0.609 -- 0.165 11.9 28.45 1293 -- --
335.05 0.853 8.72 5.21 0.674 -2.57 -- 8.8 0.0121 11.3 29.9 1318 -- --
337.62 0.856 8.88 3.68 0.64 -1.62 -- -- 0.11 11 28.81 1256 -- --
359.97 0.884 8.76 5.05 -- -2.62 -- 7.42 0.108 -- 29.24 1187 -- --
461.56 1.01 8.83 3.2 0.871 -- 0.516 -- 0.306 11.7 -- -- -- --
462.71 1.01 8.83 3.22 0.869 -- -- -- 0.309 11.8 -- -- -- --
360.23 0.884 8.87 3.71 -- -1.85 -- -- 0.221 -- 27.82 1153 -- --
674.13 1.21 8.96 -- 0.674 -1.12 -- -- -0.289 11.1 30.85 1176 -- --
510.23 1.06 8.85 3.19 -- -- -- -- 0.298 -- -- -- -- --
735.47 1.27 8.91 -- 0.832 -- -- -- -0.0495 11.5 -- -- -- --
701.18 1.23 8.98 -- -- -1.25 -- -- -0.31 -- 31.5 1091 -- --
778.91 1.3 8.93 -- -- -- -- -- -0.0563 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 328.15 wind 3 43200 > th dose independent rect. 2 3
3 329.15 wind 3 43200 < th dose independent rect. 2 2
5 329.79 radiation 40 1440 > th dose dependent sin 13 NA
6 331.45 radiation 10 1440 > th dose dependent rect. 16 15
7 332.77 radiation 30 1440 > th dose dependent rect. 13 20
9 333.08 wind 3 43200 > th dose independent rect. 4 1
13 333.73 radiation 30 14400 > th dose independent rect. 16 16
15 334.42 radiation 20 1440 > th dose independent rect. 16 15
16 334.51 radiation 40 1440 > th dose dependent rect. 13 3
37 335.24 wind 7 43200 > th dose dependent rect. 3 11
39 335.37 wind 3 43200 > th dose dependent rect. 5 2
41 335.38 radiation 1 1440 > th dose dependent rect. 17 13
42 335.56 radiation 10 1440 < th dose dependent rect. 18 12
44 335.62 wind 3 43200 > th dose dependent rect. 2 12
47 335.81 temperature 30 1440 > th dose dependent rect. 14 23
50 335.86 wind 7 43200 > th dose independent rect. 10 1
58 336.10 temperature 30 1440 > th dose dependent rect. 9 10
72 336.13 temperature 30 1440 > th dose dependent no NA NA
199 336.28 wind 3 43200 > th dose dependent sin 5 NA
201 336.31 temperature 30 1440 > th dose dependent sin 22 NA
227 336.45 wind 3 43200 > th dose dependent rect. 24 15
237 336.66 wind 7 43200 > th dose dependent rect. 20 18
254 336.70 wind 3 43200 > th dose independent rect. 2 9
273 336.77 wind 7 43200 > th dose independent rect. 4 10
284 336.98 temperature 30 1440 > th dose dependent sin 10 NA
287 337.03 wind 7 43200 > th dose dependent rect. 9 5
289 337.04 wind 7 43200 < th dose independent rect. 4 10
291 337.09 wind 9 43200 < th dose independent rect. 20 18
295 337.18 radiation 10 1440 > th dose dependent rect. 16 2
326 337.31 wind 7 43200 > th dose independent rect. 6 8
350 337.40 wind 7 43200 < th dose independent rect. 10 1
353 337.46 radiation 40 1440 < th dose dependent rect. 21 9
381 337.73 wind 7 43200 < th dose independent rect. 6 8
404 337.85 wind 7 43200 > th dose dependent rect. 10 3
405 337.85 wind 9 43200 < th dose dependent rect. 2 10
416 338.06 temperature 25 14400 > th dose dependent rect. 4 2
439 338.53 radiation 30 14400 > th dose independent rect. 7 1
455 338.54 humidity 50 4320 < th dose dependent rect. 16 1
459 338.55 radiation 30 1440 < th dose dependent rect. 16 16
477 338.62 radiation 20 1440 < th dose independent rect. 16 15
494 338.81 humidity 50 4320 < th dose independent rect. 16 18
504 338.97 humidity 50 4320 < th dose dependent rect. 16 18
512 339.09 radiation 1 1440 < th dose dependent rect. 18 9
515 339.13 radiation 20 1440 > th dose independent rect. 16 1
516 339.13 humidity 50 4320 < th dose independent rect. 16 2
585 339.33 radiation 1 1440 < th dose dependent rect. 18 7
600 339.44 wind 5 43200 < th dose independent rect. 6 1
614 339.64 wind 7 43200 > th dose independent rect. 10 3
642 339.83 radiation 40 1440 < th dose independent sin 13 NA
645 339.86 humidity 50 4320 > th dose independent rect. 16 13
652 339.95 radiation 20 1440 < th dose independent rect. 16 1
653 339.96 wind 1 43200 > th dose dependent rect. 2 5
654 339.98 wind 3 43200 < th dose independent rect. 2 9
656 340.01 wind 7 43200 < th dose independent rect. 10 3
663 340.06 humidity 50 4320 > th dose independent rect. 16 11
667 340.08 temperature 30 1440 > th dose independent rect. 15 21
668 340.09 humidity 50 4320 > th dose independent rect. 16 9
670 340.10 radiation 40 1440 < th dose independent rect. 13 20
673 340.12 humidity 50 4320 > th dose independent rect. 16 2
707 340.32 temperature 30 1440 < th dose independent rect. 15 21
708 340.33 humidity 50 4320 > th dose independent rect. 16 16
755 340.72 wind 9 43200 > th dose independent rect. 20 19
756 340.72 wind 7 43200 > th dose dependent rect. 12 1
762 340.77 radiation 1 1440 < th dose dependent rect. 18 1
766 340.80 temperature 30 1440 > th dose independent sin 11 NA
778 340.94 temperature 30 1440 < th dose independent sin 10 NA
784 340.99 radiation 1 1440 > th dose dependent rect. 5 1
805 341.06 radiation 20 1440 < th dose independent rect. 16 11
836 341.41 radiation 20 1440 < th dose independent rect. 16 9
850 341.51 radiation 10 1440 < th dose dependent rect. 2 4
861 341.62 wind 7 43200 > th dose independent rect. 12 1
867 341.71 wind 1 43200 > th dose dependent rect. 6 5
869 341.74 radiation 10 1440 < th dose dependent rect. 5 1
916 342.11 temperature 30 1440 > th dose independent rect. 9 10
934 342.16 temperature 30 1440 < th dose independent rect. 9 2
946 342.28 wind 5 43200 > th dose independent rect. 6 1
947 342.29 wind 9 43200 < th dose dependent rect. 2 5
968 342.46 temperature 30 1440 > th dose independent no NA NA