Os07g0113200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0113200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.64 | 0.3 | 11.2 | 0.592 | 0.988 | -0.824 | 0.291 | 2.58 | -0.135 | 17 | 1.468 | 221 | -- | -- |
| 43.33 | 0.307 | 11.2 | 0.576 | 0.989 | -0.461 | -0.0864 | -- | -0.113 | 17 | 1.9 | 168 | -- | -- |
| 40.79 | 0.297 | 11.2 | 0.593 | 0.986 | -0.827 | -- | 2.36 | -0.136 | 17 | 1.5 | 225 | -- | -- |
| 43.24 | 0.306 | 11.2 | 0.553 | 0.988 | -0.454 | -- | -- | -0.125 | 17.1 | 1.9 | 161 | -- | -- |
| 67.23 | 0.382 | 11.2 | 0.768 | -- | -1.28 | -- | 1.54 | -0.156 | -- | 2.713 | 150 | -- | -- |
| 46.21 | 0.319 | 11.2 | 0.46 | 1.15 | -- | 0.0361 | -- | -0.0928 | 17.1 | -- | -- | -- | -- |
| 46.21 | 0.318 | 11.2 | 0.46 | 1.15 | -- | -- | -- | -0.0927 | 17.1 | -- | -- | -- | -- |
| 70.76 | 0.392 | 11.2 | 0.732 | -- | -1.16 | -- | -- | -0.164 | -- | 2.96 | 151 | -- | -- |
| 50.54 | 0.331 | 11.2 | -- | 1.05 | -0.305 | -- | -- | -0.168 | 17.2 | 1.5 | 164 | -- | -- |
| 115.42 | 0.502 | 11.2 | 0.419 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 51.8 | 0.337 | 11.2 | -- | 1.14 | -- | -- | -- | -0.144 | 17.1 | -- | -- | -- | -- |
| 84.1 | 0.427 | 11.2 | -- | -- | -1.04 | -- | -- | -0.235 | -- | 2.947 | 159 | -- | -- |
| 120.06 | 0.511 | 11.2 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.71 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 20 | 7 |
| 3 | 39.77 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 15 |
| 4 | 39.80 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 18 |
| 7 | 39.88 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 14 |
| 9 | 39.91 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 17 | 39.99 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 20 | 5 |
| 33 | 40.09 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 14 |
| 39 | 40.12 | wind | 1 | 270 | > th | dose independent | rect. | 4 | 23 |
| 41 | 40.14 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 1 |
| 45 | 40.15 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 20 |
| 57 | 40.21 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 23 |
| 68 | 40.25 | temperature | 20 | 90 | > th | dose independent | rect. | 12 | 23 |
| 69 | 40.26 | wind | 1 | 270 | > th | dose independent | sin | 10 | NA |
| 86 | 40.34 | wind | 1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 111 | 40.38 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 21 |
| 117 | 40.40 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 9 |
| 131 | 40.44 | wind | 1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 144 | 40.47 | temperature | 20 | 10 | > th | dose independent | sin | 7 | NA |
| 178 | 40.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 20 | 7 |
| 261 | 40.74 | wind | 1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 270 | 40.76 | wind | 1 | 270 | < th | dose independent | rect. | 20 | 11 |
| 275 | 40.77 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 287 | 40.80 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 311 | 40.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 318 | 40.86 | humidity | 80 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 321 | 40.87 | wind | 1 | 270 | < th | dose independent | rect. | 11 | 20 |
| 329 | 40.88 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 356 | 40.93 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 3 |
| 366 | 40.95 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 379 | 40.96 | wind | 1 | 270 | > th | dose independent | rect. | 20 | 14 |
| 407 | 41.00 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 409 | 41.00 | wind | 3 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 446 | 41.05 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 23 | 4 |
| 455 | 41.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 472 | 41.07 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 473 | 41.08 | wind | 1 | 270 | < th | dose independent | sin | 8 | NA |
| 481 | 41.08 | wind | 1 | 270 | < th | dose independent | rect. | 3 | 23 |
| 494 | 41.09 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 554 | 41.17 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 6 |
| 569 | 41.18 | wind | 1 | 270 | > th | dose independent | rect. | 16 | 23 |
| 600 | 41.23 | wind | 1 | 270 | > th | dose independent | rect. | 14 | 23 |
| 604 | 41.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 646 | 41.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 648 | 41.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 9 |
| 659 | 41.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 14 |
| 668 | 41.29 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 707 | 41.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 734 | 41.34 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 752 | 41.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 20 | 15 |
| 754 | 41.36 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 771 | 41.37 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 7 |
| 780 | 41.37 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 23 |
| 787 | 41.38 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 23 |
| 801 | 41.40 | humidity | 80 | 270 | > th | dose independent | rect. | 24 | 8 |
| 809 | 41.40 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 23 |
| 811 | 41.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 824 | 41.41 | humidity | 50 | 270 | > th | dose dependent | sin | 9 | NA |
| 860 | 41.44 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 22 |
| 863 | 41.44 | wind | 9 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 868 | 41.45 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 17 |
| 896 | 41.46 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 21 |
| 898 | 41.46 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 906 | 41.47 | humidity | 90 | 270 | > th | dose independent | rect. | 24 | 6 |
| 912 | 41.48 | wind | 1 | 270 | > th | dose independent | no | NA | NA |
| 923 | 41.48 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 23 |
| 961 | 41.51 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 976 | 41.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 993 | 41.52 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 3 |