Os07g0110000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0110000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.86 | 0.525 | 8.08 | -0.325 | 0.819 | -2.66 | 0.0977 | 0.39 | -0.241 | 3.52 | 24.99 | 6059 | -- | -- |
| 121.34 | 0.513 | 8.09 | -0.424 | 0.916 | -2.51 | 0.358 | -- | -0.262 | 3.47 | 24.8 | 6992 | -- | -- |
| 117.77 | 0.505 | 8.04 | -0.382 | 0.833 | -2.58 | -- | 0.246 | -0.154 | 3.6 | 25 | 7578 | -- | -- |
| 117.49 | 0.505 | 8.07 | -0.424 | 0.835 | -2.57 | -- | -- | -0.142 | 3.46 | 24.98 | 7583 | -- | -- |
| 156.17 | 0.582 | 8.04 | -0.177 | -- | -2.56 | -- | 0.681 | -0.0576 | -- | 25 | 7595 | -- | -- |
| 357.7 | 0.887 | 8.25 | -1.67 | 0.75 | -- | -0.102 | -- | -0.93 | 3.99 | -- | -- | -- | -- |
| 357.73 | 0.886 | 8.25 | -1.67 | 0.749 | -- | -- | -- | -0.929 | 3.99 | -- | -- | -- | -- |
| 155.39 | 0.581 | 8.04 | -0.299 | -- | -2.61 | -- | -- | -0.00117 | -- | 24.95 | 9063 | -- | -- |
| 120.45 | 0.511 | 8.03 | -- | 0.94 | -2.76 | -- | -- | 0.00738 | 3.23 | 24.9 | 8270 | -- | -- |
| 388.38 | 0.921 | 8.25 | -1.64 | -- | -- | -- | -- | -0.909 | -- | -- | -- | -- | -- |
| 431.11 | 0.971 | 8.2 | -- | 0.717 | -- | -- | -- | -0.743 | 4.02 | -- | -- | -- | -- |
| 157.43 | 0.584 | 8.02 | -- | -- | -2.71 | -- | -- | 0.083 | -- | 24.85 | 9062 | -- | -- |
| 459.16 | 1 | 8.21 | -- | -- | -- | -- | -- | -0.727 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 2 | 123.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 16 | 124.07 | temperature | 25 | 1440 | > th | dose dependent | sin | 7 | NA |
| 19 | 124.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 13 |
| 34 | 125.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 42 | 125.43 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 99 | 126.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 108 | 127.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 179 | 127.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 197 | 128.14 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 211 | 128.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 223 | 128.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 240 | 128.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 263 | 128.63 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 292 | 128.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 295 | 128.82 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 298 | 128.82 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 319 | 128.93 | temperature | 20 | 4320 | > th | dose dependent | sin | 14 | NA |
| 346 | 129.06 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 351 | 129.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 378 | 129.18 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 494 | 129.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 20 |
| 548 | 130.00 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 847 | 131.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 19 |
| 909 | 131.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 20 |