Os07g0108800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1).
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Os07g0108800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.18 | 0.711 | 3.84 | -0.00751 | 0.782 | -1.78 | 1.79 | 3.79 | 0.347 | 2.31 | 32.5 | 1200 | -- | -- |
| 229.94 | 0.706 | 3.77 | 0.612 | 0.781 | -1.36 | 1.84 | -- | 0.347 | 2.17 | 32.6 | 1199 | -- | -- |
| 240.89 | 0.723 | 3.84 | -0.0356 | 0.79 | -1.79 | -- | 3.6 | 0.344 | 2.54 | 32.58 | 1212 | -- | -- |
| 241.22 | 0.723 | 3.77 | 0.557 | 0.786 | -1.41 | -- | -- | 0.36 | 2.53 | 32.41 | 1183 | -- | -- |
| 276.14 | 0.774 | 3.84 | 0.0286 | -- | -1.91 | -- | 3.53 | 0.381 | -- | 32.5 | 1191 | -- | -- |
| 317.18 | 0.835 | 3.83 | 0.957 | 0.982 | -- | 2.13 | -- | 0.0954 | 2.09 | -- | -- | -- | -- |
| 334.27 | 0.856 | 3.83 | 0.893 | 0.99 | -- | -- | -- | 0.0824 | 2.25 | -- | -- | -- | -- |
| 276.09 | 0.774 | 3.76 | 0.545 | -- | -1.52 | -- | -- | 0.378 | -- | 32.4 | 1180 | -- | -- |
| 248.77 | 0.735 | 3.78 | -- | 0.784 | -1.46 | -- | -- | 0.299 | 2.55 | 32.46 | 1200 | -- | -- |
| 392.56 | 0.926 | 3.82 | 0.935 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 355.31 | 0.882 | 3.85 | -- | 1.01 | -- | -- | -- | -0.0171 | 2.27 | -- | -- | -- | -- |
| 283.63 | 0.784 | 3.77 | -- | -- | -1.61 | -- | -- | 0.343 | -- | 32.42 | 1181 | -- | -- |
| 415.62 | 0.952 | 3.85 | -- | -- | -- | -- | -- | 0.00262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.39 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 3 | 229.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 5 | 230.83 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 11 | 232.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 13 | 232.59 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 33 | 232.94 | temperature | 30 | 1440 | > th | dose dependent | sin | 18 | NA |
| 35 | 232.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 127 | 233.23 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 142 | 233.26 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 313 | 235.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 352 | 236.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 380 | 237.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 404 | 237.81 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 416 | 238.10 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 443 | 238.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 464 | 239.00 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 487 | 239.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 510 | 239.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 512 | 239.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 513 | 239.47 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 526 | 239.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 535 | 239.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 547 | 239.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 552 | 239.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 14 |
| 556 | 239.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 589 | 239.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 606 | 240.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 608 | 240.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 628 | 240.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 632 | 240.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 656 | 240.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 661 | 240.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 21 |
| 665 | 240.15 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 670 | 240.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 686 | 240.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 747 | 240.30 | temperature | 30 | 1440 | < th | dose independent | sin | 18 | NA |
| 756 | 240.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 791 | 240.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 795 | 240.64 | temperature | 30 | 1440 | > th | dose independent | sin | 14 | NA |
| 829 | 240.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 909 | 240.93 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |