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Os07g0102000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Tetraacyldisaccharide-1-P 4'-kinase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0172) R2 : 0.000983
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0242 (0.0361) R2dN8 : 0.00127 R2N8 : 0.000983
σ : 0.323
deviance : 47.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.88 0.277 9.3 -0.00486 0.626 0.326 0.0399 0.124 0.0191 1.09 3 1 -- --
35.06 0.276 9.3 -0.0127 0.622 0.286 -0.0415 -- 0.0249 0.836 15.44 4 -- --
34.89 0.275 9.3 -0.00418 0.652 0.315 -- 0.117 0.035 0.979 15.4 4 -- --
34.78 0.275 9.3 0.021 0.656 0.32 -- -- 0.0234 1.03 16.1 8 -- --
47.12 0.321 9.29 0.0544 -- -0.0859 -- 0.0604 0.0244 -- 15.4 4 -- --
38.87 0.292 9.3 0.0298 0.381 -- -0.155 -- 0.0205 1.58 -- -- -- --
38.96 0.292 9.3 0.035 0.38 -- -- -- 0.0215 1.56 -- -- -- --
38.21 0.288 9.32 0.14 -- -0.287 -- -- -0.0744 -- 0.04 141 -- --
34.76 0.275 9.3 -- 0.675 0.342 -- -- 0.0215 0.964 16.1 9 -- --
47.82 0.323 9.29 0.0502 -- -- -- -- 0.0298 -- -- -- -- --
39 0.292 9.3 -- 0.381 -- -- -- 0.0176 1.56 -- -- -- --
36.6 0.282 9.29 -- -- -0.331 -- -- 0.0403 -- 0.04373 131 -- --
47.88 0.323 9.29 -- -- -- -- -- 0.0242 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.76 temperature 20.0 90 > th dose dependent rect. 9 6
3 31.86 temperature 15.0 270 > th dose dependent rect. 7 7
5 31.92 temperature 20.0 10 > th dose dependent rect. 9 7
31 32.67 temperature 25.0 270 > th dose independent rect. 24 13
40 32.80 temperature 25.0 90 > th dose independent rect. 9 6
42 32.81 atmosphere 1000.0 90 > th dose independent rect. 15 18
58 32.98 temperature 25.0 270 > th dose independent rect. 9 4
72 33.14 atmosphere 1000.0 10 > th dose independent rect. 16 18
81 33.19 temperature 25.0 90 > th dose dependent rect. 20 19
85 33.25 temperature 25.0 270 < th dose independent rect. 1 10
87 33.26 temperature 25.0 270 > th dose dependent rect. 20 17
99 33.32 radiation 10.0 270 > th dose independent rect. 7 7
100 33.32 humidity 90.0 270 < th dose independent rect. 1 13
102 33.32 atmosphere 995.0 90 > th dose dependent rect. 15 18
112 33.36 temperature 25.0 90 > th dose dependent rect. 23 16
130 33.38 temperature 25.0 90 > th dose dependent rect. 1 14
148 33.46 temperature 25.0 10 > th dose dependent rect. 20 20
154 33.50 radiation 10.0 30 > th dose independent rect. 9 7
156 33.51 wind 7.0 270 < th dose independent rect. 7 7
171 33.54 radiation 20.0 10 < th dose independent rect. 5 15
185 33.59 atmosphere 1000.0 270 > th dose independent rect. 13 20
187 33.59 temperature 25.0 10 > th dose dependent rect. 1 15
194 33.60 temperature 25.0 10 > th dose dependent rect. 23 17
198 33.62 temperature 25.0 270 < th dose independent rect. 1 14
201 33.63 wind 7.0 90 < th dose independent rect. 9 6
206 33.63 atmosphere 1000.0 10 > th dose independent rect. 5 15
210 33.63 atmosphere 995.0 10 > th dose dependent rect. 16 17
230 33.68 radiation 30.0 90 < th dose independent rect. 15 18
238 33.69 temperature 25.0 270 < th dose independent rect. 1 17
250 33.71 temperature 15.0 270 > th dose independent rect. 18 9
251 33.71 atmosphere 1000.0 90 > th dose independent rect. 4 15
288 33.77 temperature 30.0 720 < th dose independent rect. 18 1
289 33.77 humidity 90.0 270 < th dose independent rect. 7 7
321 33.84 temperature 10.0 270 > th dose dependent rect. 19 19
330 33.86 temperature 10.0 90 > th dose dependent rect. 9 18
348 33.90 radiation 30.0 10 < th dose dependent rect. 5 15
383 33.98 radiation 20.0 10 < th dose dependent sin 21 NA
390 33.99 temperature 25.0 270 > th dose dependent sin 7 NA
409 34.02 wind 7.0 10 < th dose independent rect. 9 7
440 34.05 temperature 25.0 270 > th dose independent sin 6 NA
445 34.05 radiation 1.0 90 < th dose dependent sin 12 NA
456 34.07 wind 7.0 270 < th dose independent rect. 9 4
481 34.07 temperature 10.0 10 > th dose dependent rect. 9 19
503 34.09 temperature 25.0 270 < th dose independent sin 6 NA
508 34.09 radiation 20.0 90 < th dose independent rect. 4 15
521 34.10 radiation 40.0 90 < th dose dependent rect. 15 19
568 34.15 radiation 40.0 90 < th dose dependent rect. 4 15
574 34.16 wind 7.0 270 < th dose independent rect. 17 22
583 34.17 wind 7.0 270 < th dose independent rect. 9 16
596 34.18 radiation 10.0 10 < th dose independent sin 21 NA
620 34.19 temperature 15.0 90 > th dose independent rect. 9 6
633 34.21 precipitation 0.1 90 < th dose independent rect. 9 6
638 34.21 precipitation 0.1 90 < th dose dependent rect. 9 6
667 34.25 atmosphere 1015.0 90 < th dose independent rect. 9 6
670 34.25 temperature 10.0 90 > th dose independent rect. 15 18
674 34.25 humidity 70.0 270 > th dose dependent rect. 2 7
676 34.26 radiation 20.0 10 > th dose independent sin 21 NA
678 34.26 wind 1.0 90 > th dose independent rect. 9 6
679 34.26 precipitation 0.1 270 < th dose independent rect. 7 7
684 34.26 precipitation 0.1 270 < th dose dependent rect. 7 7
691 34.27 temperature 15.0 270 > th dose independent rect. 7 7
695 34.27 radiation 1.0 90 > th dose independent rect. 16 17
697 34.27 atmosphere 1000.0 30 > th dose independent rect. 4 19
711 34.28 radiation 40.0 270 < th dose dependent rect. 2 16
728 34.30 wind 9.0 270 < th dose dependent rect. 7 7
744 34.33 temperature 20.0 90 > th dose independent rect. 4 5
747 34.33 atmosphere 995.0 270 > th dose independent rect. 7 7
748 34.33 atmosphere 1015.0 270 < th dose independent rect. 7 7
760 34.34 temperature 15.0 270 > th dose independent rect. 9 16
777 34.35 precipitation 0.1 270 < th dose independent rect. 14 17
786 34.35 precipitation 0.1 270 < th dose dependent rect. 14 17
788 34.36 atmosphere 995.0 90 > th dose independent rect. 9 6
791 34.36 humidity 60.0 270 > th dose independent rect. 18 9
812 34.38 wind 1.0 270 > th dose independent rect. 7 7
818 34.38 temperature 15.0 10 > th dose dependent rect. 21 19
825 34.39 temperature 15.0 270 > th dose independent rect. 19 18
831 34.39 radiation 1.0 270 < th dose dependent rect. 18 9
832 34.39 temperature 10.0 90 > th dose dependent rect. 23 16
834 34.40 radiation 10.0 270 > th dose independent sin 4 NA
847 34.41 humidity 50.0 1440 < th dose independent rect. 16 1
854 34.41 radiation 1.0 270 > th dose dependent rect. 7 6
856 34.41 temperature 15.0 10 > th dose dependent rect. 9 17
858 34.41 radiation 40.0 10 < th dose dependent rect. 14 20
866 34.42 humidity 50.0 1440 < th dose dependent rect. 16 1
869 34.42 radiation 30.0 270 < th dose dependent rect. 2 8
877 34.43 temperature 30.0 270 < th dose independent rect. 18 9
883 34.43 wind 9.0 270 < th dose dependent rect. 9 4
888 34.44 radiation 1.0 90 < th dose independent sin 12 NA
899 34.44 temperature 25.0 90 > th dose dependent sin 4 NA
912 34.45 wind 7.0 270 < th dose independent rect. 21 16
941 34.46 temperature 15.0 270 > th dose independent rect. 21 16
951 34.46 wind 7.0 270 < th dose independent rect. 18 20
958 34.47 wind 9.0 270 < th dose independent rect. 18 9
961 34.47 radiation 1.0 270 < th dose independent rect. 18 9
962 34.47 radiation 20.0 270 < th dose independent rect. 18 9
966 34.47 temperature 10.0 270 > th dose independent rect. 3 15
967 34.47 atmosphere 1015.0 270 < th dose independent rect. 3 15
980 34.48 radiation 1.0 90 > th dose independent sin 12 NA
996 34.48 temperature 20.0 30 > th dose dependent rect. 16 17