Os06g0731400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0731400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.21 | 0.245 | 10.8 | 0.0157 | 0.648 | 1.07 | 0.0903 | 0.0941 | 0.215 | 0.238 | 15.39 | 373 | -- | -- |
| 27.19 | 0.243 | 10.8 | -0.0014 | 0.628 | 1.08 | 0.0771 | -- | 0.21 | 0.223 | 15.1 | 400 | -- | -- |
| 27.21 | 0.243 | 10.8 | 0.0138 | 0.628 | 1.08 | -- | 0.116 | 0.216 | 0.217 | 15.01 | 400 | -- | -- |
| 27.21 | 0.243 | 10.8 | -0.00547 | 0.607 | 1.07 | -- | -- | 0.21 | 0.196 | 15.1 | 429 | -- | -- |
| 39.97 | 0.294 | 10.8 | -0.043 | -- | 1.33 | -- | 0.297 | 0.183 | -- | 12.26 | 777 | -- | -- |
| 40.71 | 0.299 | 10.8 | 0.241 | 0.671 | -- | 0.0991 | -- | 0.373 | 22.4 | -- | -- | -- | -- |
| 40.75 | 0.299 | 10.8 | 0.237 | 0.67 | -- | -- | -- | 0.372 | 22.4 | -- | -- | -- | -- |
| 40 | 0.295 | 10.8 | -0.114 | -- | 1.32 | -- | -- | 0.165 | -- | 15.17 | 777 | -- | -- |
| 27.21 | 0.243 | 10.8 | -- | 0.607 | 1.07 | -- | -- | 0.211 | 0.193 | 15.1 | 429 | -- | -- |
| 68.19 | 0.386 | 10.8 | 0.248 | -- | -- | -- | -- | 0.375 | -- | -- | -- | -- | -- |
| 42.24 | 0.304 | 10.8 | -- | 0.672 | -- | -- | -- | 0.346 | 22.4 | -- | -- | -- | -- |
| 40.18 | 0.295 | 10.8 | -- | -- | 1.23 | -- | -- | 0.184 | -- | 15.9 | 775 | -- | -- |
| 69.82 | 0.39 | 10.8 | -- | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 2 | 25.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 5 | 25.86 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 6 | 25.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 16 | 25.94 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 21 | 25.99 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 22 | 25.99 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 62 | 26.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 82 | 26.01 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 105 | 26.02 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 115 | 26.03 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 120 | 26.04 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 121 | 26.04 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 128 | 26.07 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 198 | 26.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 203 | 26.41 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 225 | 26.54 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 227 | 26.55 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 229 | 26.57 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 252 | 26.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 253 | 26.70 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 259 | 26.74 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 280 | 26.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 283 | 26.85 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 290 | 26.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 295 | 26.92 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 300 | 26.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 303 | 26.98 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 305 | 26.98 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 315 | 27.03 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 323 | 27.06 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 328 | 27.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 347 | 27.13 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 351 | 27.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 356 | 27.17 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 358 | 27.18 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 361 | 27.18 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 401 | 27.31 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 407 | 27.32 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 21 |
| 423 | 27.35 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 428 | 27.36 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 469 | 27.44 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 487 | 27.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 494 | 27.48 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 506 | 27.50 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 523 | 27.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 547 | 27.55 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 664 | 27.69 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 665 | 27.69 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 709 | 27.73 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 755 | 27.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 756 | 27.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 758 | 27.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 772 | 27.79 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 775 | 27.80 | temperature | 20.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 796 | 27.82 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 848 | 27.86 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 862 | 27.87 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 867 | 27.88 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 922 | 27.93 | wind | 7.0 | 4320 | > th | dose dependent | sin | 12 | NA |