Os06g0731100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0731100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.62 | 0.268 | 9.65 | 1.08 | 0.62 | 0.211 | -0.32 | 2 | 0.507 | 1.92 | 0.1404 | 4683 | -- | -- |
| 33.59 | 0.27 | 9.68 | 1.05 | 0.614 | 0.695 | -0.233 | -- | 0.521 | 1.87 | 0.5 | 2642 | -- | -- |
| 33 | 0.268 | 9.65 | 1.08 | 0.618 | 0.202 | -- | 2 | 0.507 | 1.85 | 0.1217 | 4682 | -- | -- |
| 33.97 | 0.271 | 9.68 | 1.08 | 0.617 | 0.678 | -- | -- | 0.516 | 1.84 | 0.5001 | 2621 | -- | -- |
| 56.1 | 0.349 | 9.65 | 1.07 | -- | 0.222 | -- | 2.11 | 0.516 | -- | 0.07129 | 4839 | -- | -- |
| 42.25 | 0.305 | 9.7 | 1.25 | 0.635 | -- | -0.218 | -- | 0.471 | 1.87 | -- | -- | -- | -- |
| 42.43 | 0.305 | 9.7 | 1.26 | 0.634 | -- | -- | -- | 0.472 | 1.83 | -- | -- | -- | -- |
| 56.42 | 0.35 | 9.68 | 1.06 | -- | 0.758 | -- | -- | 0.528 | -- | 0.5029 | 2402 | -- | -- |
| 47.24 | 0.32 | 9.69 | -- | 0.652 | 1.09 | -- | -- | 0.515 | 1.84 | 0.5178 | 23899 | -- | -- |
| 66.81 | 0.382 | 9.69 | 1.28 | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
| 84.13 | 0.429 | 9.73 | -- | 0.658 | -- | -- | -- | 0.332 | 1.88 | -- | -- | -- | -- |
| 73.1 | 0.398 | 9.68 | -- | -- | 1.1 | -- | -- | 0.53 | -- | 0.5049 | 23899 | -- | -- |
| 110.3 | 0.49 | 9.72 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 2 | 32.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 5 | 32.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 9 | 32.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 11 | 32.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 13 | 32.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 14 | 32.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 18 | 32.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 28 | 32.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 30 | 32.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 31 | 32.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 44 | 32.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 58 | 32.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 17 |
| 66 | 32.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 71 | 32.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 78 | 32.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 79 | 32.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 82 | 32.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 99 | 32.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 100 | 32.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 122 | 33.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 20 |
| 133 | 33.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 149 | 33.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 22 |
| 153 | 33.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 156 | 33.05 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 165 | 33.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 169 | 33.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 211 | 33.21 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 21 | NA |
| 215 | 33.22 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 226 | 33.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 234 | 33.29 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 13 | NA |
| 245 | 33.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 246 | 33.32 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 282 | 33.38 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 283 | 33.38 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 284 | 33.38 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 285 | 33.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 14 |
| 307 | 33.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 20 |
| 308 | 33.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 314 | 33.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 20 |
| 317 | 33.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 364 | 33.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 365 | 33.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 381 | 33.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 405 | 33.53 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 450 | 33.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 548 | 33.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 553 | 33.74 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 554 | 33.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 18 |
| 556 | 33.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 559 | 33.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 18 |
| 561 | 33.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 20 |
| 670 | 33.83 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 677 | 33.83 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 694 | 33.86 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 739 | 33.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 22 |
| 741 | 33.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 742 | 33.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 746 | 33.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 753 | 33.92 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 757 | 33.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 764 | 33.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 23 |
| 796 | 33.95 | precipitation | 0.1 | 4320 | > th | dose independent | no | NA | NA |
| 798 | 33.95 | precipitation | 0.1 | 4320 | < th | dose independent | no | NA | NA |
| 807 | 33.95 | precipitation | 0.1 | 4320 | < th | dose dependent | no | NA | NA |
| 826 | 33.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 935 | 34.05 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 940 | 34.05 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 945 | 34.05 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 978 | 34.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 979 | 34.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 16 |