Os06g0730600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S9A, prolyl oligopeptidase family protein.
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Os06g0730600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S9A, prolyl oligopeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.12 | 0.342 | 7.4 | 0.0102 | 0.398 | -1.71 | -0.915 | -0.462 | 0.223 | 24 | 20.58 | 106 | -- | -- |
| 53.27 | 0.34 | 7.39 | 0.0858 | 0.39 | -1.75 | -0.818 | -- | 0.25 | 23.9 | 20.6 | 107 | -- | -- |
| 56.01 | 0.349 | 7.38 | 0.194 | 0.391 | -1.78 | -- | 0.402 | 0.273 | 23.8 | 20.6 | 108 | -- | -- |
| 56.17 | 0.349 | 7.39 | 0.126 | 0.404 | -1.73 | -- | -- | 0.249 | 23.8 | 20.6 | 109 | -- | -- |
| 60.93 | 0.366 | 7.35 | 0.284 | -- | -2.06 | -- | 0.682 | 0.336 | -- | 20.8 | 23 | -- | -- |
| 102.99 | 0.476 | 7.45 | -0.266 | 0.959 | -- | -0.416 | -- | -0.0454 | 2.05 | -- | -- | -- | -- |
| 103.64 | 0.477 | 7.45 | -0.254 | 0.959 | -- | -- | -- | -0.0431 | 2.1 | -- | -- | -- | -- |
| 61.36 | 0.365 | 7.37 | 0.183 | -- | -2.04 | -- | -- | 0.31 | -- | 20.74 | 22 | -- | -- |
| 56.55 | 0.35 | 7.39 | -- | 0.416 | -1.68 | -- | -- | 0.228 | 24 | 20.6 | 109 | -- | -- |
| 158.76 | 0.589 | 7.44 | -0.214 | -- | -- | -- | -- | -0.0203 | -- | -- | -- | -- | -- |
| 105.34 | 0.48 | 7.44 | -- | 0.955 | -- | -- | -- | -0.0148 | 2.09 | -- | -- | -- | -- |
| 62.11 | 0.368 | 7.37 | -- | -- | -1.99 | -- | -- | 0.279 | -- | 20.8 | 17 | -- | -- |
| 159.97 | 0.59 | 7.44 | -- | -- | -- | -- | -- | 0.0034 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.36 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 2 | 53.74 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 7 | 54.41 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 54.54 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 10 | 54.75 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 19 | 55.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 31 | 55.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 39 | 56.00 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 44 | 56.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 50 | 56.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 51 | 56.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 56 | 56.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 61 | 56.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 76 | 56.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 85 | 56.56 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 105 | 56.75 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 114 | 56.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 122 | 56.83 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 126 | 56.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 20 |
| 165 | 57.01 | temperature | 25 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 175 | 57.04 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 187 | 57.11 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 207 | 57.17 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 261 | 57.34 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 266 | 57.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 295 | 57.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 306 | 57.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 12 |
| 310 | 57.48 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 318 | 57.52 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 324 | 57.52 | temperature | 20 | 4320 | > th | dose dependent | sin | 11 | NA |
| 333 | 57.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 350 | 57.60 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 382 | 57.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 384 | 57.69 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 481 | 57.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 530 | 58.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 679 | 58.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 711 | 58.31 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 739 | 58.34 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 745 | 58.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 768 | 58.37 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 774 | 58.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 775 | 58.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 786 | 58.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 889 | 58.51 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |