BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0730600 Os06g0730600|AK070316
(746 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50380.1 | chr1:18662480-18666185 FORWARD LENGTH=711 1063 0.0
AT1G69020.1 | chr1:25943949-25947197 REVERSE LENGTH=758 308 6e-84
AT5G66960.1 | chr5:26736209-26739493 REVERSE LENGTH=793 209 5e-54
AT1G76140.1 | chr1:28571187-28574852 FORWARD LENGTH=796 157 2e-38
AT1G20380.1 | chr1:7061665-7065047 FORWARD LENGTH=732 150 3e-36
>AT1G50380.1 | chr1:18662480-18666185 FORWARD LENGTH=711
Length = 710
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/699 (71%), Positives = 580/699 (82%), Gaps = 1/699 (0%)
Query: 48 KVPRELAQHGDVRVDNYYWLRDDSRSHPDVLAHLRAENLYTATIMSDVKNLEDEIYAEIR 107
KV + GDVRVDNYYWLRDDSR++PD+L++LR EN YT +MS K E++++AEIR
Sbjct: 12 KVEHVMEMFGDVRVDNYYWLRDDSRTNPDMLSYLREENHYTDFVMSGTKQFENQLFAEIR 71
Query: 108 ARIKEDDIGAPLRKGQYYYYNRTLTGKEYVQHCRRLVPTD-APVTVYDVMPTGPNAPHEH 166
RIKEDDI APLRKG YYYY + L GKEY+QHCRRL+ + A +VYD MPTGP+AP EH
Sbjct: 72 GRIKEDDISAPLRKGPYYYYEKNLQGKEYIQHCRRLITDNKAEPSVYDTMPTGPDAPPEH 131
Query: 167 IILDENVKAEGHDYYSIGAFKVSPNGKLVAYAQDTKGDEIYTVYVIDAESGKFVGQPLEG 226
+ILDEN KA+ HDYY IGAFK SP+ KLVAYA+DTKGDEIYTV VID+E+ K VGQ L+G
Sbjct: 132 VILDENTKAQEHDYYRIGAFKASPDHKLVAYAEDTKGDEIYTVNVIDSEALKPVGQQLKG 191
Query: 227 ITSDIEWAGDDHLVYITMDTILRPDKVWLHMLESNQSDDICLYHEKDDMFSLGLQTSESK 286
+TS +EWAG+D L+YITMD ILRPDKVWLH L + QS D+CLYHEKDDMFSL L SES
Sbjct: 192 LTSYLEWAGNDALLYITMDEILRPDKVWLHKLGTEQSSDVCLYHEKDDMFSLELHASESH 251
Query: 287 QYLFVESGSKNTSFIFYLDISKQSKELVVLTPCVYGIDTTASHRGNHFYIKRRSEEFYNS 346
+YLFV S SK T F+F LD+SK L VLTP V GID++ SHRGNHF+I+RRS EFYNS
Sbjct: 252 KYLFVASESKTTRFVFSLDVSKTQDGLRVLTPRVDGIDSSVSHRGNHFFIQRRSTEFYNS 311
Query: 347 ELIACPLDNVAETTVLLPHRESVKIQSFQLFENHIAVYERQNGLPKVTAYRLPATGEPIG 406
ELIACP+D+ ++TTVLLPHRESVKIQ QLF +H+AV+ER+NGL K+T +RLPA G+P+
Sbjct: 312 ELIACPVDDTSKTTVLLPHRESVKIQEIQLFRDHLAVFERENGLQKITVHRLPAEGQPLE 371
Query: 407 QLQGGREIDFVDPAYDVEPEQSQFGSSVVRFHYSSMRTPPSVFDYDMDSGVSVLKKIDTV 466
LQGGR + FVDP Y V+ +S+F S V+RF Y SM+TPPSV+DYDMDSG SV+KKIDTV
Sbjct: 372 GLQGGRNVSFVDPVYSVDSTESEFSSRVLRFKYCSMKTPPSVYDYDMDSGTSVVKKIDTV 431
Query: 467 LGGFDASNYVTERKWAAASDGTQIPMTILYRKDRVNLDGSDPMLLYGYGSYEICIDPSFG 526
LGGFDASNYVTERKW AASDGTQIPM+I+Y K LDGSDP+LLYGYGSYEI +DP F
Sbjct: 432 LGGFDASNYVTERKWVAASDGTQIPMSIVYNKKLAKLDGSDPLLLYGYGSYEISVDPYFK 491
Query: 527 RSRFSLVDRGFIYVIAHIRGGGEMGRKWYEDGKLLNKRNTFTDFIACAEHLIENKYCSKE 586
SR SL+DRGF +VIAH+RGGGEMGR+WYE+GKLL K+NTFTDFIACAE LIE KYCSKE
Sbjct: 492 ASRLSLLDRGFTFVIAHVRGGGEMGRQWYENGKLLKKKNTFTDFIACAERLIELKYCSKE 551
Query: 587 KLCINGRSAGGLLMGAVLNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPR 646
KLC+ GRSAGGLLMGAV+NMRPDLFK +AGVPFVDVLTTMLDPTIPLTTSEWEEWGDPR
Sbjct: 552 KLCMEGRSAGGLLMGAVVNMRPDLFKVVIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPR 611
Query: 647 XXXXXXXXXXXXPVDNLKAQGYPNILVTAGLNDPRVMYSEPAKYVAKLRELKTDDNLLLF 706
PVDN+ AQ YPN+LVTAGLNDPRVMYSEP K+VAKLRE+KTD+N+LLF
Sbjct: 612 KEEFYFYMKSYSPVDNVTAQNYPNMLVTAGLNDPRVMYSEPGKWVAKLREMKTDNNVLLF 671
Query: 707 KCELGAGHFSKSGRFEKLREDAFTYAFILKALGMAPKAA 745
KCELGAGHFSKSGRFEKL+EDAFT+AF++K L M P +
Sbjct: 672 KCELGAGHFSKSGRFEKLQEDAFTFAFMMKVLDMIPASG 710
>AT1G69020.1 | chr1:25943949-25947197 REVERSE LENGTH=758
Length = 757
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 216/755 (28%), Positives = 348/755 (46%), Gaps = 110/755 (14%)
Query: 48 KVPRELAQHGDVRVDNYYWLRDDSRSHPDVLAHLRAENLYTATIMSDVKNLEDEIYAEIR 107
K+P ++ HG R D ++W+++ + D + L+ EN Y+ M+D + L ++++E++
Sbjct: 45 KIPFAISSHGITRQDPFHWMKNTDDT--DFVDFLKRENSYSQAFMADTETLRRDLFSEMK 102
Query: 108 ARIKEDDIGAPLRKGQYYYYNRTLTGKEYVQHCRRLVPTDAPVTVYDVMPTGPNAPHEHI 167
RI E+ P R GQ+ Y GKEY CRRL + + E +
Sbjct: 103 TRIPEEIFTPPERWGQWLYRQYIPKGKEYPLLCRRLEKGKT-----NWLSGLFRGEEEEV 157
Query: 168 ILDENVKAEGHDYYSIGAFKVSPNGKLVAYAQDTKGDEIYTVYVIDAESGKFVGQPLEGI 227
+LD N AE Y +G +VSP+ +AY D +GD GI
Sbjct: 158 VLDWNQIAEQFGYVHVGVCRVSPDHNYLAYTVDPEGD---------------------GI 196
Query: 228 TSDIEWAGDDHLVYITMDTILRPDKVWLHMLESNQSDDICLYHEKDDMFSLGLQTSESKQ 287
T L Y D RP +V + +ES+ DD ++ E+D F + + T++ +
Sbjct: 197 T----------LFYTVTDENQRPHRVVVTNVESDGRDDAVVFTERDSSFCVDITTTKDGK 246
Query: 288 YLFVESGSKNTSFIFYLDISKQSKELVVLTPCVYGIDTTASHRGNHFYIKRRSEEFYNSE 347
++ + S S+ +S ++ ++ K L V G+ H FYI S SE
Sbjct: 247 FVTINSNSRTSSEVYIVNADKPMAGLQRTRERVPGVQCFLEHHNGFFYILTNSPSNAISE 306
Query: 348 -------LIACPLDNVAET---TVLLPHRESVKIQSFQLFENHIAVYERQNGLPKVTAYR 397
L C ++ + + TV P + V IQ +F +++ +Y + GLP + +
Sbjct: 307 WSGEGYYLTRCLVEEIEASDWQTVFRPD-DDVVIQDMDMFNDYLVLYLNKKGLPMLCSID 365
Query: 398 LPATGEPIGQLQGGREIDFVDPAYDVEPEQS---------QFGSSVVRFHYSSMRTPPSV 448
+P + +D + P Y P S F SS+ R SS P ++
Sbjct: 366 MPIKA-------NTKHMDDLVPWYFPLPVDSCSVAPGSNHDFQSSIYRVVLSSPVIPDTI 418
Query: 449 FDYDMDSGV-SVLKKIDTVLGGFDAS---------------------------------- 473
DYD+ + S++++ V+ D+S
Sbjct: 419 VDYDVSRRLFSIVQQEGGVVDNSDSSKPWYTADRSTENNGQLNDRTSEGEDGQLDSRMPK 478
Query: 474 ------NYVTERKWAAASDGTQIPMTILYRKDRVNLDGSDPMLLYGYGSYEICIDPSFGR 527
YV ER+ ++ DG ++P+TILY ++ S P +L GYG+Y +D S+
Sbjct: 479 WEDLSDTYVCERQEVSSHDGVEVPLTILYSREAWKKSES-PGMLIGYGAYGEVLDKSWCT 537
Query: 528 SRFSLVDRGFIYVIAHIRGGGEMGRKWYEDGKLLNKRNTFTDFIACAEHLIENKYCSKEK 587
+R S++DRG++ A +RGGG W++ G K+N+ DFI A++L+E Y +
Sbjct: 538 NRLSMLDRGWVIAFADVRGGGSGEFSWHKSGTRSLKQNSIQDFIYSAKYLVEKGYVHRHH 597
Query: 588 LCINGRSAGGLLMGAVLNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRX 647
L G SAG +L A +NM P LF+A + VPFVDVL T+ DP +PLT + EE+G+P
Sbjct: 598 LAAVGYSAGAILPAAAMNMHPSLFQAVILKVPFVDVLNTLSDPNLPLTLLDHEEFGNPDN 657
Query: 648 XXXXXXXXXXXPVDNLKAQ-GYPNILVTAGLNDPRVMYSEPAKYVAKLRELKTDD--NLL 704
P D ++ YP++LVT +D RV E AK+VAK+R+ D +
Sbjct: 658 QTDFGSILSYSPYDKIRKDVCYPSMLVTTSFHDSRVGVWEGAKWVAKIRDSTCHDCSRAV 717
Query: 705 LFKCELGAGHFSKSGRFEKLREDAFTYAFILKALG 739
+ K + GHF + GR+ + E AF YAF+LK +G
Sbjct: 718 ILKTNMNGGHFGEGGRYAQCEETAFDYAFLLKVMG 752
>AT5G66960.1 | chr5:26736209-26739493 REVERSE LENGTH=793
Length = 792
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 195/762 (25%), Positives = 348/762 (45%), Gaps = 102/762 (13%)
Query: 56 HGDVRVDNYYWLR--DDSRSHPDVLAHLRAENLYTATIMSDVKNLEDEIYAEIRARIKED 113
H D Y W+ +D + + ++ E YT +++D ++ ++ +E+ +R+ +
Sbjct: 52 HDATWEDPYSWMSKLEDKVAMRHMDIYMEQEEKYTEAVLADTDRIQTKLQSEMASRLSFE 111
Query: 114 DIGAPLRKGQYYYYNRTLTGKEYVQHCRRL-------VPTDAPVTVYDVMPTGPNAPHEH 166
PLR G + YY R GK+Y CRRL + +P +D +G E
Sbjct: 112 LSTPPLRWGPWLYYRRVEEGKQYPVLCRRLASLHEEFISHKSPAAGFDYT-SGKRI--EQ 168
Query: 167 IILDENVKAE---GHDYYSIGAFKVSPNGKLVAYAQDTKGDEIYTVYVIDAESGKFVGQP 223
+LD N +AE G+ Y + ++SP+ K +AY K ++ + + V + SG +P
Sbjct: 169 KLLDYNQEAERFGGYAYEEMS--EISPDHKFLAYTMYDKDNDYFKLCVRNLNSGALCSKP 226
Query: 224 LEGITSDIEWAGDDH-LVYITMDTILRPDKVWLHMLESNQSDDICLYHEKDDMFSLGLQT 282
S+I WA + L+Y+ D RP +++ + S +D+ L+ E + + ++
Sbjct: 227 HADRVSNIAWAKNGQALLYVVTDQKKRPCRIYCSTIGST-DEDVLLHEEFEGNVHVNIRH 285
Query: 283 SESKQYLFVESGSKNTSFIFYLDISKQSKELVVL------TPCVYG-------IDTTASH 329
++ ++ V + S S +F ++ + L ++ C+ + T AS+
Sbjct: 286 TKDFHFVTVNTFSTTFSKVFLINAADPFSGLALVWEHNAPAHCIIEHHQGFLYLFTNASN 345
Query: 330 RG---NHFYIKRRSEEFYNSELIACPLDNVAETTVLLPHRESVKIQSFQLFENHIAVYER 386
G +H Y+ R F + + I TV + E + I+ + H+++ +
Sbjct: 346 DGGTVDHHYLLRSPVHFSSCQRIW--------ETVFINDPELI-IEDVDFCKKHLSLIVK 396
Query: 387 QNGLPKVTAYRLPATGEPIGQLQGGREIDFVDPAYDVEPEQ-SQ--------FGSSVVRF 437
+ + ++++ P+ + + + P Y P+ SQ F S +RF
Sbjct: 397 E-----MQSFKICVVDLPLKTKRVPVHLRDIKPRYLPLPKHVSQIFPGTNYDFNSPTMRF 451
Query: 438 HYSSMRTPPSVFDYDMDSG-------VSVLKKIDTVLGG------------------FDA 472
SS+ P +V DYD+ +G ++L + VL G FD
Sbjct: 452 TISSLVMPDAVVDYDLLNGKWNIVQQQNMLHERTRVLYGTANSTESPNIPSGTRTVSFDT 511
Query: 473 SNYVTERK--W-------------AAASDGTQIPMTILYRKDRVNLDGSDPMLLYGYGSY 517
+ E W ++ DG +P++I+Y + + + P LL+ +G+Y
Sbjct: 512 EDTTAENDNLWNDLTEFYACDYHEVSSHDGAMVPLSIVYSRAQKE-ENQKPGLLHVHGAY 570
Query: 518 EICIDPSFGRSRFSLVDRGFIYVIAHIRGGGEMGRKWYEDGKLLNKRNTFTDFIACAEHL 577
+D + SL+DRG++ A +RGGG G+KW++DG+ K N+ D+I CA++L
Sbjct: 571 GEMLDKRWRSELKSLLDRGWVLAYADVRGGGGKGKKWHQDGRGAKKLNSIKDYIQCAKYL 630
Query: 578 IENKYCSKEKLCINGRSAGGLLMGAVLNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLTTS 637
+EN + KL G SAGGL++ + +N PDLF+AAV VPF+D T++ P +PLT
Sbjct: 631 VENNIVEENKLAGWGYSAGGLVVASAINHCPDLFQAAVLKVPFLDPTHTLIYPILPLTAE 690
Query: 638 EWEEWGDPRXXXXXXXXXXXXPVDNL-KAQGYPNILVTAGLNDPRVMYSEPAKYVAKLRE 696
++EE+G P P DN+ K YP +LVT+ N R E AK+VA++R+
Sbjct: 691 DYEEFGYPGDINDFHAIREYSPYDNIPKDVLYPAVLVTSSFN-TRFGVWEAAKWVARVRD 749
Query: 697 LKTDDNLLLFKCELGAGHFSKSGRFEKLREDAFTYAFILKAL 738
+D L + RF + +E A AF++K +
Sbjct: 750 NTFNDPERPVLLNLTTD-IVEENRFLQTKESALEIAFLIKMM 790
>AT1G76140.1 | chr1:28571187-28574852 FORWARD LENGTH=796
Length = 795
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 177/739 (23%), Positives = 319/739 (43%), Gaps = 90/739 (12%)
Query: 56 HGDVRVDNYYWLRDDSRSHPDVLAHLRAENLYTATIMSDVKNLEDEIYAEIRARIKEDDI 115
HG D Y WL D +V ++++ T +++ + E ++ I I
Sbjct: 91 HGVKIGDPYRWLEDPDAE--EVKEFVQSQVKLTDSVLEKCETKE-KLRQNITKLIDHPRY 147
Query: 116 GAPLRKG-QYYYYNRTLTGKEYVQHCRRLVPTDAPVTVYDVMPTGPNAPHEHIILDENVK 174
+P R+G +Y+Y++ T + V + + D + P ++LD N
Sbjct: 148 DSPFRQGDKYFYFHNTGLQAQSVLYMQ------------DNLDAEPE-----VLLDPNTL 190
Query: 175 AEGHDYYSIGAFKVSPNGKLVAYAQDTKGDEIYTVYVIDAESGKFVGQPLEGIT-SDIEW 233
++ ++ F VS + K +AY + G + T+ ++ E K L + + I W
Sbjct: 191 SDD-GTVALNTFSVSEDAKYLAYGLSSSGSDWVTIKLMKIEDKKVEPDTLSWVKFTGITW 249
Query: 234 AGDDHLVY------------ITMDTILRPD---KVWLHMLESNQSDDI-CLYHEKDDMFS 277
D + I T + +++ H + ++QS DI C ++ +
Sbjct: 250 THDSKGFFYGRYPAPKEGEDIDAGTETNSNLYHELYYHFIGTDQSQDILCWRDNENPKYM 309
Query: 278 LGLQTSESKQYLFVESGSKN--TSFIFYLDISKQSKEL------VVLTPCVYGIDT---- 325
G + ++ +YL + G + ++Y D++ S L P + +DT
Sbjct: 310 FGAEVTDDGKYLIMSIGESCDPVNKLYYCDMTSLSGGLESFRGSSSFLPFIKLVDTFDAQ 369
Query: 326 -TASHRGNHFYIKRRSEEFYNSELIACPL-DNVAETTVLLPHRESVKIQSFQLFENH-IA 382
+ + +++ +L+ L + + T V+ H + V + + NH +A
Sbjct: 370 YSVISNDETLFTFLTNKDAPKYKLVRVDLKEPNSWTDVVEEHEKDVLASACAVNGNHLVA 429
Query: 383 VYERQNGLPKVTAYRLPATGEPIGQLQGGREIDFVDPAYDVEPEQSQFGSSVVRFHYSSM 442
Y + + + R +G + QL +D + DV + + F ++S
Sbjct: 430 CY--MSDVKHILQIRDLKSGSLLHQL----PLD-IGSVSDVSARRKD---NTFFFSFTSF 479
Query: 443 RTPPSVFDYDMDSG---VSVLKKIDTVLGGFDASNYVTERKWAAASDGTQIPMTILYRKD 499
TP ++ D+ + V V +++ + GFD + + + + DGT+IPM I+ +KD
Sbjct: 480 LTPGVIYKCDLANESPEVKVFREV--TVPGFDREAFQAIQVFYPSKDGTKIPMFIVAKKD 537
Query: 500 RVNLDGSDPMLLYGYGSYEICIDPSFGRSRFSLVDR-GFIYVIAHIRGGGEMGRKWYEDG 558
+ LDGS P LLY YG + I I PSF SR L G ++ A+IRGGGE G +W++ G
Sbjct: 538 -IKLDGSHPCLLYAYGGFNISITPSFSASRIVLSKHLGVVFCFANIRGGGEYGEEWHKAG 596
Query: 559 KLLNKRNTFTDFIACAEHLIENKYCSKEKLCINGRSAGGLLMGAVLNMRPDLFKAAVAGV 618
L K+N F DFI+ AE+L+ Y KLCI G S GGLL+GA +N RPDL+ A+A V
Sbjct: 597 SLAKKQNCFDDFISGAEYLVSAGYTQPSKLCIEGGSNGGLLVGACINQRPDLYGCALAHV 656
Query: 619 PFVDVLTTMLDPTIPLTTSEWEEWGDPRXXXXXXXXXXXXPVDNLKAQ---------GYP 669
+D+L + + ++G P+ N+K YP
Sbjct: 657 GVMDMLRFH---KFTIGHAWTSDYGCSENEEEFHWLIKYSPLHNVKRPWEQQTDHLVQYP 713
Query: 670 NILVTAGLNDPRVMYSEPAKYVAKLRELKTDD-------NLLLFKCELGAGHFSKSGRFE 722
+ ++ +D RV+ K +A L+ + N ++ + E+ AGH + +
Sbjct: 714 STMLLTADHDDRVVPLHSLKLLATLQHVLCTSLDNSPQMNPIIGRIEVKAGHGAGRPTQK 773
Query: 723 KLREDAFTYAFILKALGMA 741
+ E A Y+F+ K + +
Sbjct: 774 MIDEAADRYSFMAKMVNAS 792
>AT1G20380.1 | chr1:7061665-7065047 FORWARD LENGTH=732
Length = 731
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 152/299 (50%), Gaps = 23/299 (7%)
Query: 457 VSVLKKIDTVLGGFDASNYVTERKWAAASDGTQIPMTILYRKDRVNLDGSDPMLLYGYGS 516
V+V ++I + GFD + + + + + DGT IPM I+ RKD + LDGS P LLY YG
Sbjct: 433 VTVFREIG--VPGFDRTAFQVTQVFYPSKDGTDIPMFIVARKD-IKLDGSHPCLLYAYGG 489
Query: 517 YEICIDPSFGRSRFSLVDR-GFIYVIAHIRGGGEMGRKWYEDGKLLNKRNTFTDFIACAE 575
+ I + P F +R L G ++ A+IRGGGE G +W++ G L NK+N F DFI+ AE
Sbjct: 490 FSISMTPFFSATRIVLGRHLGTVFCFANIRGGGEYGEEWHKSGALANKQNCFDDFISGAE 549
Query: 576 HLIENKYCSKEKLCINGRSAGGLLMGAVLNMRPDLFKAAVAGVPFVDVLTTMLDPTIPLT 635
+L+ Y KLCI G S GG+L+GA +N RPDLF A+A V +D+L +
Sbjct: 550 YLVSAGYTQPRKLCIEGGSNGGILVGACINQRPDLFGCALAHVGVMDMLRFH---KFTIG 606
Query: 636 TSEWEEWGDPRXXXXXXXXXXXXPVDNLKAQ---------GYPNILVTAGLNDPRVMYSE 686
+ E+G P+ N+K YP+ ++ +D RV+
Sbjct: 607 HAWTSEFGCSDKEEEFHWLIKYSPLHNVKRPWEQKTDLFFQYPSTMLLTADHDDRVVPLH 666
Query: 687 PAKYVAKLR-------ELKTDDNLLLFKCELGAGHFSKSGRFEKLREDAFTYAFILKAL 738
K +A ++ E N ++ + E+ AGH + + + E A Y+F+ K +
Sbjct: 667 SYKLLATMQYELGLSLENSPQTNPIIARIEVKAGHGAGRPTQKMIDEAADRYSFMAKMV 725
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,495,774
Number of extensions: 736486
Number of successful extensions: 1518
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1504
Number of HSP's successfully gapped: 6
Length of query: 746
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 640
Effective length of database: 8,200,473
Effective search space: 5248302720
Effective search space used: 5248302720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)