Os06g0724500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os06g0724500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.08 | 0.231 | 9.6 | 0.517 | 0.931 | 0.593 | -0.881 | 0.801 | -0.105 | 6.45 | 11.27 | 6 | -- | -- |
| 24.61 | 0.231 | 9.62 | 0.4 | 0.929 | 0.63 | -0.931 | -- | -0.138 | 6.39 | 7.248 | 7 | -- | -- |
| 25.97 | 0.237 | 9.6 | 0.525 | 0.929 | 0.605 | -- | 0.955 | -0.0984 | 6.5 | 11.27 | 5 | -- | -- |
| 26.6 | 0.24 | 9.62 | 0.405 | 0.929 | 0.514 | -- | -- | -0.134 | 6.48 | 19 | 5 | -- | -- |
| 68.36 | 0.387 | 9.61 | 0.598 | -- | 0.155 | -- | 0.643 | -0.0306 | -- | 18.04 | 5 | -- | -- |
| 28.54 | 0.25 | 9.6 | 0.529 | 0.862 | -- | -0.872 | -- | -0.0501 | 7.02 | -- | -- | -- | -- |
| 30.4 | 0.258 | 9.6 | 0.514 | 0.859 | -- | -- | -- | -0.0472 | 7.22 | -- | -- | -- | -- |
| 68.75 | 0.386 | 9.62 | 0.49 | -- | 0.217 | -- | -- | -0.0614 | -- | 14.37 | 2 | -- | -- |
| 30.48 | 0.257 | 9.63 | -- | 0.96 | 0.711 | -- | -- | -0.202 | 6.28 | 17.4 | 9 | -- | -- |
| 69.43 | 0.389 | 9.62 | 0.53 | -- | -- | -- | -- | -0.0323 | -- | -- | -- | -- | -- |
| 37.36 | 0.286 | 9.61 | -- | 0.864 | -- | -- | -- | -0.104 | 7.18 | -- | -- | -- | -- |
| 74.73 | 0.403 | 9.64 | -- | -- | 0.371 | -- | -- | -0.133 | -- | 6.89 | 2 | -- | -- |
| 76.83 | 0.409 | 9.63 | -- | -- | -- | -- | -- | -0.0911 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.63 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 4 | 22.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 9 | 22.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 10 | 22.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 36 | 23.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 42 | 23.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 48 | 23.36 | wind | 5 | 720 | < th | dose independent | rect. | 8 | 6 |
| 63 | 23.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 75 | 23.46 | wind | 5 | 270 | < th | dose independent | rect. | 24 | 21 |
| 78 | 23.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 98 | 23.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 12 |
| 104 | 23.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 10 |
| 105 | 23.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 141 | 23.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 6 |
| 153 | 23.74 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 13 |
| 169 | 23.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 171 | 23.77 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 186 | 23.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 202 | 23.82 | temperature | 30 | 30 | < th | dose independent | rect. | 22 | 21 |
| 214 | 23.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 4 |
| 244 | 23.89 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 258 | 23.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 268 | 23.93 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 372 | 24.07 | wind | 7 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 373 | 24.07 | wind | 9 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 374 | 24.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 401 | 24.11 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 403 | 24.11 | wind | 9 | 720 | < th | dose dependent | rect. | 8 | 6 |
| 416 | 24.13 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 13 |
| 432 | 24.14 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 437 | 24.15 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 508 | 24.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 512 | 24.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 5 |
| 521 | 24.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 560 | 24.29 | wind | 5 | 270 | < th | dose independent | rect. | 9 | 11 |
| 623 | 24.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 673 | 24.40 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 20 |
| 724 | 24.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 748 | 24.46 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 14 |
| 771 | 24.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 781 | 24.48 | wind | 5 | 720 | < th | dose independent | rect. | 17 | 21 |
| 795 | 24.49 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 12 |
| 799 | 24.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 834 | 24.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 847 | 24.54 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 16 |
| 865 | 24.56 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 22 |
| 867 | 24.56 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 893 | 24.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 907 | 24.59 | temperature | 30 | 30 | < th | dose independent | rect. | 6 | 13 |
| 944 | 24.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 945 | 24.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 964 | 24.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 971 | 24.62 | wind | 9 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 979 | 24.63 | temperature | 25 | 720 | > th | dose independent | sin | 6 | NA |
| 981 | 24.63 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 8 |
| 997 | 24.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |