Os06g0711100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0711100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.9 | 0.338 | 9.67 | 0.771 | 1.63 | -0.492 | -0.214 | -0.34 | 0.446 | 6.02 | 25.2 | 731 | -- | -- |
| 52.1 | 0.336 | 9.67 | 0.833 | 1.63 | -0.485 | -0.132 | -- | 0.448 | 6.02 | 25.28 | 709 | -- | -- |
| 51.97 | 0.336 | 9.67 | 0.792 | 1.62 | -0.487 | -- | -0.251 | 0.452 | 6.05 | 25.26 | 710 | -- | -- |
| 52.08 | 0.336 | 9.66 | 0.855 | 1.62 | -0.493 | -- | -- | 0.479 | 6.06 | 25.2 | 704 | -- | -- |
| 120.72 | 0.512 | 9.63 | 1.59 | -- | -1.39 | -- | 1.67 | 0.772 | -- | 26.3 | 431 | -- | -- |
| 60.36 | 0.364 | 9.7 | 0.711 | 1.81 | -- | 0.0974 | -- | 0.291 | 6.39 | -- | -- | -- | -- |
| 60.38 | 0.364 | 9.7 | 0.712 | 1.81 | -- | -- | -- | 0.291 | 6.39 | -- | -- | -- | -- |
| 120.96 | 0.512 | 9.63 | 1.16 | -- | -1.34 | -- | -- | 0.733 | -- | 25.9 | 418 | -- | -- |
| 71.11 | 0.393 | 9.68 | -- | 1.78 | -0.343 | -- | -- | 0.357 | 6.16 | 25.7 | 928 | -- | -- |
| 230.35 | 0.709 | 9.73 | 0.759 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 73.76 | 0.402 | 9.71 | -- | 1.82 | -- | -- | -- | 0.212 | 6.37 | -- | -- | -- | -- |
| 152.56 | 0.575 | 9.69 | -- | -- | -1.22 | -- | -- | 0.531 | -- | 26.35 | 409 | -- | -- |
| 245.56 | 0.731 | 9.75 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 2 | 50.36 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 2 |
| 6 | 50.46 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 7 | 50.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 8 | 50.48 | temperature | 15 | 720 | > th | dose dependent | sin | 19 | NA |
| 9 | 50.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 35 | 50.70 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 14 |
| 38 | 50.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 98 | 50.95 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 12 |
| 101 | 50.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 127 | 51.03 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 205 | 51.21 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 17 |
| 316 | 51.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 319 | 51.46 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 14 |
| 330 | 51.49 | humidity | 70 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 338 | 51.52 | humidity | 70 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 366 | 51.57 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 17 |
| 406 | 51.66 | temperature | 25 | 720 | < th | dose independent | sin | 21 | NA |
| 433 | 51.73 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 16 |
| 475 | 51.81 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 21 |
| 481 | 51.82 | temperature | 25 | 720 | < th | dose independent | rect. | 2 | 18 |
| 506 | 51.88 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 16 |
| 531 | 51.92 | temperature | 25 | 720 | > th | dose independent | rect. | 22 | 22 |
| 536 | 51.93 | humidity | 60 | 720 | > th | dose independent | sin | 12 | NA |
| 560 | 51.96 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 6 |
| 593 | 52.03 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 603 | 52.04 | humidity | 70 | 720 | < th | dose dependent | sin | 12 | NA |
| 646 | 52.09 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 684 | 52.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 738 | 52.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 16 |
| 758 | 52.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 791 | 52.28 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 792 | 52.28 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 809 | 52.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 858 | 52.34 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 882 | 52.37 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 887 | 52.37 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 23 |
| 906 | 52.40 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 23 |
| 999 | 52.49 | temperature | 30 | 720 | < th | dose dependent | sin | 0 | NA |