Os06g0707200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF563 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0707200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF563 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.98 | 0.542 | 9.93 | -1.11 | 2.76 | 1.19 | 1.21 | -0.096 | -0.323 | 6.83 | 79 | 1194 | -- | -- |
| 132.99 | 0.537 | 9.93 | -1.1 | 2.76 | 1.18 | 1.21 | -- | -0.323 | 6.83 | 79 | 1197 | -- | -- |
| 136.72 | 0.545 | 9.93 | -1.1 | 2.76 | 1.19 | -- | -0.177 | -0.329 | 6.83 | 79 | 1203 | -- | -- |
| 136.76 | 0.545 | 9.93 | -1.08 | 2.76 | 1.18 | -- | -- | -0.324 | 6.82 | 79 | 1210 | -- | -- |
| 522.78 | 1.06 | 9.99 | -1 | -- | 1.35 | -- | -0.138 | -0.305 | -- | 85.17 | 1329 | -- | -- |
| 163.43 | 0.599 | 9.94 | -0.896 | 2.76 | -- | 1.22 | -- | -0.372 | 6.5 | -- | -- | -- | -- |
| 167.14 | 0.605 | 9.94 | -0.879 | 2.77 | -- | -- | -- | -0.376 | 6.51 | -- | -- | -- | -- |
| 522.73 | 1.06 | 9.99 | -0.99 | -- | 1.34 | -- | -- | -0.304 | -- | 85.43 | 1330 | -- | -- |
| 166.67 | 0.601 | 9.92 | -- | 2.73 | 1.05 | -- | -- | -0.305 | 6.81 | 99.22 | 1228 | -- | -- |
| 565.82 | 1.11 | 10 | -0.81 | -- | -- | -- | -- | -0.319 | -- | -- | -- | -- | -- |
| 187.48 | 0.641 | 9.92 | -- | 2.76 | -- | -- | -- | -0.278 | 6.53 | -- | -- | -- | -- |
| 547.86 | 1.09 | 9.99 | -- | -- | 1.23 | -- | -- | -0.27 | -- | 131.1 | 1333 | -- | -- |
| 583.11 | 1.13 | 9.98 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.66 | humidity | 80 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 14 | 135.47 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 20 | 136.06 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 23 | 136.33 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 10 |
| 29 | 136.58 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 41 | 137.11 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 49 | 137.32 | humidity | 80 | 1440 | < th | dose dependent | rect. | 12 | 20 |
| 55 | 137.41 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 2 |
| 61 | 137.56 | humidity | 80 | 1440 | < th | dose dependent | rect. | 12 | 16 |
| 68 | 137.58 | humidity | 80 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 103 | 137.87 | humidity | 70 | 1440 | < th | dose independent | sin | 15 | NA |
| 104 | 137.87 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 118 | 137.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 120 | 137.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 133 | 137.97 | humidity | 80 | 1440 | < th | dose dependent | sin | 16 | NA |
| 134 | 137.99 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 154 | 138.17 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 157 | 138.20 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 167 | 138.30 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 175 | 138.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 191 | 138.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 193 | 138.36 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 198 | 138.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 207 | 138.40 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 16 |
| 230 | 138.51 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 237 | 138.57 | humidity | 70 | 1440 | > th | dose independent | sin | 16 | NA |
| 241 | 138.58 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 14 |
| 269 | 138.71 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 309 | 138.80 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 353 | 138.91 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 381 | 139.06 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 397 | 139.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 399 | 139.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 22 |
| 428 | 139.19 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 435 | 139.20 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 437 | 139.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 21 |
| 500 | 139.27 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 517 | 139.28 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 521 | 139.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 522 | 139.30 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 526 | 139.32 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 564 | 139.38 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 594 | 139.39 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 596 | 139.40 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 602 | 139.41 | humidity | 60 | 30 | > th | dose dependent | rect. | 13 | 15 |
| 637 | 139.49 | radiation | 10 | 1440 | > th | dose independent | sin | 22 | NA |
| 670 | 139.51 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 697 | 139.57 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 703 | 139.59 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 704 | 139.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 791 | 139.61 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 808 | 139.65 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 854 | 139.80 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 857 | 139.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 859 | 139.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 862 | 139.82 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 877 | 139.85 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 6 |
| 884 | 139.86 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 894 | 139.91 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 5 |
| 996 | 140.14 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |