BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0707200 Os06g0707200|AK071568
(460 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471 277 8e-75
AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385 273 2e-73
AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501 219 2e-57
AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505 214 1e-55
AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495 207 1e-53
AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453 183 1e-46
AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456 171 7e-43
>AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471
Length = 470
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 215/370 (58%), Gaps = 23/370 (6%)
Query: 80 RPTCYVTSKRS-ERCAAVGDIRVDGNHSKI-----YINPLDKEWRTKPYARLHDAVAMDD 133
+P C+ + S E C GD+R+ G + + + + W +PYAR AM
Sbjct: 91 KPICHCNTLGSKEFCDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPAMKR 150
Query: 134 VREFTLVPFGGANHTAVPPLCTRNHSVPAFLFSSGGFAGNLYHDYTDVLVPLFTSTNHFG 193
VRE+T+ A+ + C RNHSVPA LFS GGF+ N +HD+TD+++PL+T+ F
Sbjct: 151 VREWTVKLVQNASLSR----CVRNHSVPAILFSLGGFSLNNFHDFTDIVIPLYTTARRFS 206
Query: 194 GEVQFLLSGIKDWWLDKFTPLFRQLSRYDVIDVDNDQEVHCFPRIFIGATFHR----AMG 249
GEVQFL++ W++KF L R+LS Y+VI +D + E HCF + +G HR +
Sbjct: 207 GEVQFLVTNKNLLWINKFKELVRKLSNYEVIYIDEEDETHCFSSVIVGLNRHRDYDKELT 266
Query: 250 IDPARSPGGVTVADFKRLLRRTFRLERAVASRTGAPRRDKPXXXXXXXXXXXXFLNERXX 309
DP+ S +++DF++ LR T+ L + + R KP F+N
Sbjct: 267 TDPSNSE--YSMSDFRKFLRDTYSLRNSAVTT-----RRKPRILILSRSRSRAFVNAGEI 319
Query: 310 XXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLIQVVP 369
F V +AE + T++ +FA VNS DVM+GVHGAG+TNMVFLP A++IQ++P
Sbjct: 320 ARAARQIGFKVVVAEAN--TEIASFAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILP 377
Query: 370 FGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRDHFYIQHPYDVHKKGWDAI 429
GG EWL ++ F+ P+K M++ Y+EY ++ +ES+L + Y RDH +++ P V K+GW
Sbjct: 378 IGGFEWLAKMDFEYPSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTF 437
Query: 430 KTVYLDKQNV 439
K+VYL +QNV
Sbjct: 438 KSVYLVQQNV 447
>AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385
Length = 384
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 216/371 (58%), Gaps = 17/371 (4%)
Query: 80 RPTCYVTSKRSERCAAVGDIRVDGNHSKI-----YINPLDKEWRTKPYARLHDAVAMDDV 134
+P C + R+E C GD+RV G + + + + W +PYAR D VAM V
Sbjct: 2 KPICTKLA-RTEFCELNGDVRVHGKSATVSAAITFAFSGNSTWHIRPYARKGDTVAMKRV 60
Query: 135 REFTLVPFGGANH--TAVPPLCTRNHSVPAFLFSSGGFAGNLYHDYTDVLVPLFTSTNHF 192
RE+T+ A+ A C RNHSVPA +FS GG++ N +HD+TD+++PL+T+ F
Sbjct: 61 REWTVKLEQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFHDFTDIVIPLYTTARRF 120
Query: 193 GGEVQFLLSGIKDWWLDKFTPLFRQLSRYDVIDVDNDQEVHCFPRIFIGATFHRA----M 248
GEVQFL++ W++KF L R+LS Y+VI +D + E HCF + +G T HR +
Sbjct: 121 NGEVQFLVTNKSPSWINKFKELVRKLSNYEVIYIDEEDETHCFSSVTVGLTRHREYFKEL 180
Query: 249 GIDPARSPGGVTVADFKRLLRRTFRLERAVASRTGAPRRDKPXXXXXXXXXXXXFLNERX 308
IDP+ S +++DF+ LR T+ L R A T RR +P F+N
Sbjct: 181 TIDPSNSE--YSMSDFRSFLRDTYSL-RNDAVATRQIRRRRPRILILARGRSRAFVNTGE 237
Query: 309 XXXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLIQVV 368
F V +AE + + FA+ VNS DVM+GVHGAGLTNMVFLP AV+IQV+
Sbjct: 238 IARAARQIGFKVVVAEAN--IGIAKFAQTVNSCDVMLGVHGAGLTNMVFLPENAVVIQVL 295
Query: 369 PFGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRDHFYIQHPYDVHKKGWDA 428
P GG EWL + F+ P++ M++ Y+EY ++ +ES+L + Y RDH ++ P V K GW+
Sbjct: 296 PIGGFEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYGRDHEIVRDPSAVAKHGWEM 355
Query: 429 IKTVYLDKQNV 439
K+VYL +QNV
Sbjct: 356 FKSVYLVQQNV 366
>AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501
Length = 500
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 191/387 (49%), Gaps = 16/387 (4%)
Query: 83 CYVTSKRSERCAAVGDIRVDGNHSKIYI-----NPLDKEWRTKPYARLHDAVAMDDVREF 137
C T RS+ C GD+R + S I++ N K + KPY R + MD V+E
Sbjct: 101 CDRTGLRSDICVMKGDVRTNSASSSIFLFTSSTNNNTKPEKIKPYTRKWETSVMDTVQEL 160
Query: 138 TLVPFGGANHTAVPPLCTRNHSVPAFLFSSGGFAGNLYHDYTDVLVPLFTSTNHFGGEVQ 197
L+ ++ + +C H VPA FS+GG+ GN+YH++ D ++PLF ++ H+ +V
Sbjct: 161 NLIT--KDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVV 218
Query: 198 FLLSGIKDWWLDKFTPLFRQLSRYDVIDVDNDQEVHCFPRIFIGATFHRAMGIDPARSPG 257
F++ DWW K+ + QLS Y ++D + D HCF +G H + ++ + G
Sbjct: 219 FVIVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRIHDELTVNSSLVIG 278
Query: 258 GVTVADFKRLLRR-------TFRLERAVASRTGAPRRDKPXXXXXXXX-XXXXFLNERXX 309
T+ DF+ +L R + E A+ T + KP LNE
Sbjct: 279 NQTIVDFRNVLDRGYSHRIQSLTQEETEANVTALDFKKKPKLVILSRNGSSRAILNENLL 338
Query: 310 XXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLIQVVP 369
F+V + P T+M R +N++DVM+GVHGA +T+ +FL + V IQ++P
Sbjct: 339 VELAEKTGFNVEVLRPQKTTEMAKIYRSLNTSDVMIGVHGAAMTHFLFLKPKTVFIQIIP 398
Query: 370 FGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRDHFYIQHPYDVHKKGWDAI 429
G +W + +PAK + + Y+ Y ++ ESSL E Y +D I+ P ++ KGW+
Sbjct: 399 L-GTDWAAETYYGEPAKKLGLKYVGYKIAPKESSLYEEYGKDDPVIRDPDSLNDKGWEYT 457
Query: 430 KTVYLDKQNVEXXXXXXXXXXERARDF 456
K +YL QNV+ R+ DF
Sbjct: 458 KKIYLQGQNVKLDLRRFRETLTRSYDF 484
>AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505
Length = 504
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 190/391 (48%), Gaps = 18/391 (4%)
Query: 83 CYVTSKRSERCAAVGDIRVDGNHSKIYI-----NPLDKEWRTKPYARLHDAVAMDDVREF 137
C T RS+ C GD+R S +++ N + KPY R + M V+E
Sbjct: 97 CDRTGSRSDVCIMKGDVRTHSASSSVFLFTSLKNKTKITKKIKPYTRKWETSVMQTVQEL 156
Query: 138 TLVPFGGANHT----AVPPLCTRNHSVPAFLFSSGGFAGNLYHDYTDVLVPLFTSTNHFG 193
LV N++ +V +C ++VPA FS+GG+ GN+YH++ D ++PLF +++HF
Sbjct: 157 NLVYRDEENNSLVVSSVNDICDVFYNVPAVFFSTGGYTGNVYHEFNDGIIPLFITSHHFN 216
Query: 194 GEVQFLLSGIKDWWLDKFTPLFRQLSRYDVIDVDNDQEVHCFPRIFIGATFHRAMGIDPA 253
+V F++ WW+ K+ + QLS Y +D + D+ HCF +G H + ++ +
Sbjct: 217 KKVVFVIVEYHSWWIMKYGDIVSQLSDYPPVDFNGDKRTHCFKEAIVGLKIHDELTVESS 276
Query: 254 RSPGGVTVADFKRLLRRTF--------RLERAVASRTGAPRRDKPXXXXXXXXXXXXFLN 305
G T+ DF+ +L + + + E A+ KP LN
Sbjct: 277 LMLGNKTILDFRNVLDQAYWPRIHGLIQEEELKAANKTEDGFKKPILVILSRNGSREILN 336
Query: 306 ERXXXXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLI 365
E F V + PD T++ R +NS+DVM+GVHGA +T+++FL + V I
Sbjct: 337 ESLLVELAEEIGFIVHVLRPDKTTELAKIYRCLNSSDVMIGVHGAAMTHLLFLKPKTVFI 396
Query: 366 QVVPFGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRDHFYIQHPYDVHKKG 425
Q++P G EW + PAK M + Y+ Y + ESSL + Y D I+ P +KG
Sbjct: 397 QIIPI-GTEWAAETYYGKPAKKMRLKYIGYKIKPKESSLYDEYGIDDPIIRDPKSFTQKG 455
Query: 426 WDAIKTVYLDKQNVEXXXXXXXXXXERARDF 456
WD K +YL++QNV+ RA DF
Sbjct: 456 WDYTKKIYLERQNVKLDLKRFRKPLSRAYDF 486
>AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495
Length = 494
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 187/381 (49%), Gaps = 30/381 (7%)
Query: 82 TCYVTSKRSERCAAVGDIRVDGNHSKIYI---NPLDKEW----RTKPYARLHDAVAMDDV 134
+C T RS+ C GDIR S I++ N L + + KPY R + M+ +
Sbjct: 101 SCDRTGYRSDICFMKGDIRTHSPSSSIFLYTSNDLTTDQVLQEKIKPYTRKWETSIMETI 160
Query: 135 REFTLVP-----FGGANHTAVPPLCTRNHSVPAFLFSSGGFAGNLYHDYTDVLVPLFTST 189
E LV FG C H VPA LFS+GG+ GNLYH++ D L+PL+ ++
Sbjct: 161 PELKLVTKDMKLFGDKRK------CEVIHEVPAVLFSTGGYTGNLYHEFNDGLIPLYITS 214
Query: 190 NHFGGEVQFLLSGIKDWWLDKFTPLFRQLSRYDVIDVDNDQEVHCFPRIFIGATFHRAMG 249
F +V F+++ WW K+ + QLS Y +ID + D+ HCF +G H +
Sbjct: 215 KRFNKKVVFVIAEYHKWWEMKYGDVLSQLSDYSLIDFNKDKRTHCFKEAIVGLRIHGELT 274
Query: 250 IDPAR-SPGGVTVADFKRLLRRTFR---------LERAVASRTGAPRRDK-PXXXXXXXX 298
+DP++ G T+ +F+ +L R +R E+ +R R+ K P
Sbjct: 275 VDPSQMQDDGTTINEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRRKAKRPKLALFSRT 334
Query: 299 XXXXFLNERXXXXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAGLTNMVFL 358
NE FD+ + PD T++ R++NS+ VM+GVHGA +T+ +F+
Sbjct: 335 GSRGITNEDLMVKMAQRIGFDIEVLRPDRTTELAKIYRVLNSSKVMVGVHGAAMTHFLFM 394
Query: 359 PSRAVLIQVVPFGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRDHFYIQHP 418
++ IQ++P G +W + +PAK + ++Y Y + ESSL E Y +D ++ P
Sbjct: 395 KPGSIFIQIIPLGT-DWAAETYYGEPAKKLGLDYNGYKILPRESSLYEKYDKDDPILKDP 453
Query: 419 YDVHKKGWDAIKTVYLDKQNV 439
+ KKGW K +YL+ Q V
Sbjct: 454 NSITKKGWQFTKGIYLNDQKV 474
>AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453
Length = 452
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 190/400 (47%), Gaps = 31/400 (7%)
Query: 56 IDEDYDSTRYKMTGPIGEEDFDPTRPTCYVTSKRSERCAAVGDIRVDGNHSKIYI----- 110
+ + ++S R K P ++ TC + + C+ G +D + +
Sbjct: 44 LQQPWESRRIKQ-APQQPQETTSATITCDRSHTNYDLCSINGSCNLDLKTGTLTLMDPTS 102
Query: 111 NPLDKEWRTKPYARLHDAVAMDDVREFTLV--PFGGANHTAVPPLCTRNHSVPAFLFSSG 168
PL ++ R PY + D M +RE TL P G +P C H +PA +FS+G
Sbjct: 103 APLVEKIR--PYPKKADNWIMPRIRELTLTSGPLG------LPRSCDITHDLPAIVFSAG 154
Query: 169 GFAGNLYHDYTDVLVPLFTSTNHFGGEVQFL--LSGIKDWWLDKFTPLFRQLSRYD---V 223
G+ G++YHD D +PLF + N + F+ + K+WW+ K+ + S++ +
Sbjct: 155 GYTGSIYHDLMDGFIPLFITANSVYPDRDFIPVVVNAKEWWMPKYIDILGTFSKHKPILL 214
Query: 224 IDVDNDQEVHCFPRIFIGATFHRAMGIDPARSPGGVTVADFKRLLRRTFRLERAVASRTG 283
+D ++ HCF +G H M IDP + P ++ DF LL E+A +
Sbjct: 215 LDKESVATTHCFTSAIVGLITHWPMTIDPTQIPNSKSLVDFHNLL------EKAFTTNIS 268
Query: 284 APRRDKPXXXXXXXXXXX--XFLNERXXXXXXXXXRFDVRIAEPDNHTDMPNFARLVNSA 341
P+ KP LNE+ F+V I P T++ +L+ S+
Sbjct: 269 TPKTHKPRLMLVSRYGNIGRVILNEQEIKEMLEDVGFEVIIFRPSKTTNLKEAYKLIKSS 328
Query: 342 DVMMGVHGAGLTNMVFLPSRAVLIQVVPFGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDE 401
M+GVHGA LT+++FL ++ +QVVP G L W ++ ++ PAK M + Y+EY V+ +E
Sbjct: 329 HGMVGVHGAALTHLLFLRPGSIFVQVVPLG-LGWASKPCYESPAKTMKLEYLEYKVNVEE 387
Query: 402 SSLRELYPRDHFYIQHPYDVHKKGWDAIKT-VYLDKQNVE 440
SSL E Y RD ++ P W+A K VYL +Q+V
Sbjct: 388 SSLIEKYNRDDLVLKDPIAYRGMDWNATKMKVYLKEQDVS 427
>AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456
Length = 455
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 161/329 (48%), Gaps = 18/329 (5%)
Query: 118 RTKPYARLHDAVAMDDVREFTLVPFGGANHTAVPPLCTRNHSVPAFLFSSGGFAGNLYHD 177
+ +PY R + M +RE L G ++ T C H PA +FS+GG+ G++YHD
Sbjct: 112 KIRPYPRKSENWIMPRIRELKLTS-GPSDLTRS---CDITHDSPAIVFSAGGYTGSIYHD 167
Query: 178 YTDVLVPLFTSTNHFGGEVQFLLSGI--KDWWLDKFTPLFRQLSRYDVI--DVDNDQEVH 233
+ D +PLF + N + F+L + K+WW+ K+ + S++ I D +N H
Sbjct: 168 FIDGFIPLFITANSVYPDRDFILVVVNPKEWWMPKYIDILGTFSKHKTILLDKENASITH 227
Query: 234 CFPRIFIGATFHRAMGIDPARSPGGVTVADFKRLLRRTFRLERAVASRTGAPRRDKPXXX 293
CF +G H M IDP + P ++ DF LL ++A+ + +KP
Sbjct: 228 CFTSATVGLISHGPMTIDPTQIPNSKSLVDFHNLL------DKALNPNLSIIKINKPRLI 281
Query: 294 XXXX--XXXXXFLNERXXXXXXXXXRFDVRIAEPDNHTDMPNFARLVNSADVMMGVHGAG 351
LNE F+V P T + +L+ S+ M+GVHGA
Sbjct: 282 LVRRYGNIGRVILNEEEIREMLEDVGFEVITFRPSKTTSLREAYKLIKSSHGMIGVHGAA 341
Query: 352 LTNMVFLPSRAVLIQVVPFGGLEWLTRVTFKDPAKDMDVNYMEYNVSFDESSLRELYPRD 411
LT ++FL +VL+Q+VP G L W+++ F+ PAK M ++Y EY V+ +ESSL E Y RD
Sbjct: 342 LTQLLFLRPGSVLVQIVPVG-LGWVSKTCFETPAKAMKLDYTEYRVNVEESSLIEKYSRD 400
Query: 412 HFYIQHPYDVHKKGWDAIKT-VYLDKQNV 439
++ P W+ K VYL Q+V
Sbjct: 401 DLVLKDPIAYRGMDWNVTKMKVYLKDQDV 429
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,881,938
Number of extensions: 419303
Number of successful extensions: 749
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 724
Number of HSP's successfully gapped: 7
Length of query: 460
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 358
Effective length of database: 8,310,137
Effective search space: 2975029046
Effective search space used: 2975029046
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)