Os06g0707000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF563 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0707000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF563 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.83 | 0.782 | 4.49 | -1.52 | 0.846 | 2.33 | 0.205 | 0.381 | -0.716 | 9.98 | 25.04 | 1393 | -- | -- |
| 276.81 | 0.775 | 4.5 | -1.63 | 0.852 | 2.4 | 0.21 | -- | -0.76 | 10 | 24.9 | 1384 | -- | -- |
| 276.94 | 0.775 | 4.49 | -1.54 | 0.848 | 2.36 | -- | 0.285 | -0.736 | 9.97 | 24.92 | 1388 | -- | -- |
| 276.97 | 0.775 | 4.5 | -1.62 | 0.851 | 2.39 | -- | -- | -0.759 | 9.98 | 24.9 | 1385 | -- | -- |
| 317.73 | 0.83 | 4.51 | -1.49 | -- | 2.26 | -- | 0.461 | -0.729 | -- | 24.84 | 1446 | -- | -- |
| 508.1 | 1.06 | 4.43 | -0.789 | 0.772 | -- | -0.0782 | -- | -0.452 | 8.67 | -- | -- | -- | -- |
| 508.12 | 1.06 | 4.43 | -0.792 | 0.772 | -- | -- | -- | -0.452 | 8.68 | -- | -- | -- | -- |
| 317.87 | 0.83 | 4.53 | -1.62 | -- | 2.32 | -- | -- | -0.773 | -- | 24.76 | 1449 | -- | -- |
| 340.19 | 0.859 | 4.44 | -- | 0.838 | 2 | -- | -- | -0.478 | 9.93 | 25.52 | 1384 | -- | -- |
| 541.79 | 1.09 | 4.45 | -0.79 | -- | -- | -- | -- | -0.446 | -- | -- | -- | -- | -- |
| 524.64 | 1.07 | 4.41 | -- | 0.77 | -- | -- | -- | -0.364 | 8.76 | -- | -- | -- | -- |
| 380.64 | 0.909 | 4.44 | -- | -- | 1.87 | -- | -- | -0.363 | -- | 26.46 | 1444 | -- | -- |
| 558.25 | 1.1 | 4.43 | -- | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 19 |
| 17 | 276.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 18 | 276.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 26 | 276.98 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 37 | 277.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 40 | 277.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 46 | 277.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 61 | 277.45 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 69 | 277.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 87 | 277.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 159 | 278.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 174 | 278.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 191 | 279.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 342 | 283.86 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 364 | 284.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 457 | 285.65 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 481 | 286.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 501 | 286.60 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 549 | 287.27 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 588 | 287.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 591 | 287.81 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 611 | 288.08 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 612 | 288.08 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 633 | 288.41 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 657 | 288.50 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 659 | 288.52 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 665 | 288.59 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 731 | 289.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 733 | 289.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 804 | 290.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 859 | 291.56 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 868 | 291.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 962 | 292.89 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 981 | 293.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |