BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0707000 Os06g0707000|Os06g0707000
(446 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471 283 1e-76
AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385 269 3e-72
AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501 239 3e-63
AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505 232 2e-61
AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495 226 2e-59
AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456 195 4e-50
AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453 193 2e-49
>AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471
Length = 470
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 225/399 (56%), Gaps = 24/399 (6%)
Query: 49 IPEPHLRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANAT 108
+ +P C+ ++ + C++ G +RI G+++ V L A + A N+T
Sbjct: 89 MEKPICHCNTLGSK-EFCDVSGDVRIHGKSATV-LAAVTFA-------------FSGNST 133
Query: 109 RWKIQPYTRKGESRVMPGITEVTVRLVTADEAPPCDEWHDVPAIVYSNGGYCGNYYHDFN 168
W ++PY RK + M + E TV+LV C H VPAI++S GG+ N +HDF
Sbjct: 134 -WYMRPYARKDQVPAMKRVREWTVKLVQNASLSRCVRNHSVPAILFSLGGFSLNNFHDFT 192
Query: 169 DNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCYRRAT 228
D +IPL+ T+R +GEVQ LVT K W K++E+V L+ YE + +D E C+
Sbjct: 193 DIVIPLYTTARRFSGEVQFLVTNKNLLWINKFKELVRKLSNYEVIYIDEEDETHCFSSVI 252
Query: 229 VGLHSHKDLSIDPRRAPNN--YSMVDFKRFLMWRYALPREHAIRMEEEDKSKKPRLLVIN 286
VGL+ H+D + P+N YSM DF++FL Y+L R A+ +KPR+L+++
Sbjct: 253 VGLNRHRDYDKELTTDPSNSEYSMSDFRKFLRDTYSL-RNSAVTTR-----RKPRILILS 306
Query: 287 XXXXXXFVNLDEIXXXXXXXXXXXXXXXLDAHIPAAASAVNSYDAMVAVHGSGLTNLVFL 346
FVN EI + I + A VNS D M+ VHG+G+TN+VFL
Sbjct: 307 RSRSRAFVNAGEIARAARQIGFKVVVAEANTEIASFAITVNSCDVMLGVHGAGMTNMVFL 366
Query: 347 PMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYPRAHPVFLDP 406
P NA+VIQ++P+G E LA ++ P + MN+RYL+Y ITAEESTL + Y R H DP
Sbjct: 367 PDNAIVIQILPIGGFEWLAKMDFEYPSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDP 426
Query: 407 LPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLLKALHLL 445
L + K+ W K +YL QQ+V +D+ RF+ VL+KAL LL
Sbjct: 427 LAVAKRGWGTFKSVYLVQQNVSVDINRFKLVLVKALELL 465
>AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385
Length = 384
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 219/394 (55%), Gaps = 29/394 (7%)
Query: 62 RSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANATRWKIQPYTRKGES 121
R++ CE+ G +R+ G+++ V A+I+ N+T W I+PY RKG++
Sbjct: 10 RTEFCELNGDVRVHGKSATV------SAAITF--------AFSGNST-WHIRPYARKGDT 54
Query: 122 RVMPGITEVTVRL-VTADEAPP-----CDEWHDVPAIVYSNGGYCGNYYHDFNDNIIPLF 175
M + E TV+L AD+ C H VPA+++S GGY N +HDF D +IPL+
Sbjct: 55 VAMKRVREWTVKLEQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFHDFTDIVIPLY 114
Query: 176 ITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCYRRATVGLHSH- 234
T+R GEVQ LVT K W K++E+V L+ YE + +D E C+ TVGL H
Sbjct: 115 TTARRFNGEVQFLVTNKSPSWINKFKELVRKLSNYEVIYIDEEDETHCFSSVTVGLTRHR 174
Query: 235 ---KDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRMEEEDKSKKPRLLVINXXXXX 291
K+L+IDP + + YSM DF+ FL Y+L R A+ + + + L++
Sbjct: 175 EYFKELTIDP--SNSEYSMSDFRSFLRDTYSL-RNDAVATRQIRRRRPRILILARGRSRA 231
Query: 292 XFVNLDEIXXXXXXXXXXXXXXXLDAHIPAAASAVNSYDAMVAVHGSGLTNLVFLPMNAV 351
FVN EI + I A VNS D M+ VHG+GLTN+VFLP NAV
Sbjct: 232 -FVNTGEIARAARQIGFKVVVAEANIGIAKFAQTVNSCDVMLGVHGAGLTNMVFLPENAV 290
Query: 352 VIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYPRAHPVFLDPLPIHK 411
VIQV+P+G E LA ++ P MN+RYL+Y I EESTL + Y R H + DP + K
Sbjct: 291 VIQVLPIGGFEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYGRDHEIVRDPSAVAK 350
Query: 412 QSWSLVKDIYLGQQDVRLDVRRFRPVLLKALHLL 445
W + K +YL QQ+V +D+ RF+PVL+KAL LL
Sbjct: 351 HGWEMFKSVYLVQQNVSIDINRFKPVLVKALELL 384
>AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501
Length = 500
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 209/407 (51%), Gaps = 33/407 (8%)
Query: 49 IPEPHLRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANAT 108
I + CD RSD+C M+G +R +S +FL S + N
Sbjct: 94 ISNGTICCDRTGLRSDICVMKGDVRTNSASSSIFLFTSS---------------TNNNTK 138
Query: 109 RWKIQPYTRKGESRVMPGITEVTVRLVTADEAPP----CDEWHDVPAIVYSNGGYCGNYY 164
KI+PYTRK E+ VM + E+ L+T D CD +HDVPA+ +S GGY GN Y
Sbjct: 139 PEKIKPYTRKWETSVMDTVQELN--LITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVY 196
Query: 165 HDFNDNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCY 224
H+FND IIPLFITS+H +V ++ + WW KY ++V L+ Y VD + + R C+
Sbjct: 197 HEFNDGIIPLFITSQHYNKKVVFVIVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCF 256
Query: 225 RRATVGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRMEEE------DKSK 278
+ ATVGL H +L+++ N ++VDF+ L Y+ + + E E D K
Sbjct: 257 KEATVGLRIHDELTVNSSLVIGNQTIVDFRNVLDRGYSHRIQSLTQEETEANVTALDFKK 316
Query: 279 KPRLLVINXXXXXXFVNLDEIXXXXXXXXXXXXXXXL----DAHIPAAASAVNSYDAMVA 334
KP+L++++ + L+E L + ++N+ D M+
Sbjct: 317 KPKLVILSRNGSSRAI-LNENLLVELAEKTGFNVEVLRPQKTTEMAKIYRSLNTSDVMIG 375
Query: 335 VHGSGLTNLVFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSE 394
VHG+ +T+ +FL V IQ++PLG + A YG P + + ++Y+ Y I +ES+L E
Sbjct: 376 VHGAAMTHFLFLKPKTVFIQIIPLG-TDWAAETYYGEPAKKLGLKYVGYKIAPKESSLYE 434
Query: 395 VYPRAHPVFLDPLPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLLKA 441
Y + PV DP ++ + W K IYL Q+V+LD+RRFR L ++
Sbjct: 435 EYGKDDPVIRDPDSLNDKGWEYTKKIYLQGQNVKLDLRRFRETLTRS 481
>AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505
Length = 504
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 207/404 (51%), Gaps = 35/404 (8%)
Query: 56 CDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANATRWKIQPY 115
CD +RSDVC M+G +R +S VFL SL + KI+PY
Sbjct: 97 CDRTGSRSDVCIMKGDVRTHSASSSVFLFT-SLKN--------------KTKITKKIKPY 141
Query: 116 TRKGESRVMPGITEVTV--------RLVTADEAPPCDEWHDVPAIVYSNGGYCGNYYHDF 167
TRK E+ VM + E+ + LV + CD +++VPA+ +S GGY GN YH+F
Sbjct: 142 TRKWETSVMQTVQELNLVYRDEENNSLVVSSVNDICDVFYNVPAVFFSTGGYTGNVYHEF 201
Query: 168 NDNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCYRRA 227
ND IIPLFITS H +V ++ + WW KY +IV L+ Y PVD + ++R C++ A
Sbjct: 202 NDGIIPLFITSHHFNKKVVFVIVEYHSWWIMKYGDIVSQLSDYPPVDFNGDKRTHCFKEA 261
Query: 228 TVGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRMEE--------EDKSKK 279
VGL H +L+++ N +++DF+ L Y PR H + EE ED KK
Sbjct: 262 IVGLKIHDELTVESSLMLGNKTILDFRNVLDQAY-WPRIHGLIQEEELKAANKTEDGFKK 320
Query: 280 PRLLVINXXXXXXFVNLDEIXXXXXXXXXXXXXXXLDAHIPAAA--SAVNSYDAMVAVHG 337
P L++++ +N + D A +NS D M+ VHG
Sbjct: 321 PILVILSRNGSREILNESLLVELAEEIGFIVHVLRPDKTTELAKIYRCLNSSDVMIGVHG 380
Query: 338 SGLTNLVFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYP 397
+ +T+L+FL V IQ++P+G E A YG P + M ++Y+ Y I +ES+L + Y
Sbjct: 381 AAMTHLLFLKPKTVFIQIIPIG-TEWAAETYYGKPAKKMRLKYIGYKIKPKESSLYDEYG 439
Query: 398 RAHPVFLDPLPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLLKA 441
P+ DP ++ W K IYL +Q+V+LD++RFR L +A
Sbjct: 440 IDDPIIRDPKSFTQKGWDYTKKIYLERQNVKLDLKRFRKPLSRA 483
>AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495
Length = 494
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 210/408 (51%), Gaps = 33/408 (8%)
Query: 51 EPHLRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANATRW 110
E + CD RSD+C M+G IR +S +FL N D +
Sbjct: 97 EESISCDRTGYRSDICFMKGDIRTHSPSSSIFLYTS------------NDLTTD-QVLQE 143
Query: 111 KIQPYTRKGESRVMPGITEVTVRLVTAD-----EAPPCDEWHDVPAIVYSNGGYCGNYYH 165
KI+PYTRK E+ +M I E+ +LVT D + C+ H+VPA+++S GGY GN YH
Sbjct: 144 KIKPYTRKWETSIMETIPEL--KLVTKDMKLFGDKRKCEVIHEVPAVLFSTGGYTGNLYH 201
Query: 166 DFNDNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQRVRCYR 225
+FND +IPL+ITS+ +V ++ + +WW KY +++ L+ Y +D + ++R C++
Sbjct: 202 EFNDGLIPLYITSKRFNKKVVFVIAEYHKWWEMKYGDVLSQLSDYSLIDFNKDKRTHCFK 261
Query: 226 RATVGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAI-RMEEE---------D 275
A VGL H +L++DP + ++ + ++ R ++ R PR + + R+EE+
Sbjct: 262 EAIVGLRIHGELTVDPSQMQDDGTTINEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRR 321
Query: 276 KSKKPRLLVINXXXXXXFVNLDEIXXXXXXXXXXXXXXXLDAHIPAAA--SAVNSYDAMV 333
K+K+P+L + + N D + D A +NS MV
Sbjct: 322 KAKRPKLALFSRTGSRGITNEDLMVKMAQRIGFDIEVLRPDRTTELAKIYRVLNSSKVMV 381
Query: 334 AVHGSGLTNLVFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLS 393
VHG+ +T+ +F+ ++ IQ++PLG + A YG P + + + Y Y I ES+L
Sbjct: 382 GVHGAAMTHFLFMKPGSIFIQIIPLG-TDWAAETYYGEPAKKLGLDYNGYKILPRESSLY 440
Query: 394 EVYPRAHPVFLDPLPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLLKA 441
E Y + P+ DP I K+ W K IYL Q VRLD+ RF+ +L+ A
Sbjct: 441 EKYDKDDPILKDPNSITKKGWQFTKGIYLNDQKVRLDLHRFKKLLIDA 488
>AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456
Length = 455
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 196/391 (50%), Gaps = 31/391 (7%)
Query: 54 LRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANATRWKIQ 113
+ CD D+C + G+ + +T + L+ +L + +A V+ KI+
Sbjct: 69 ITCDRSHTSYDLCSINGSCILNPKTGTLTLMDRTLTT--------SAPLVE------KIR 114
Query: 114 PYTRKGESRVMPGITEVTVRLVTADEAPPCDEWHDVPAIVYSNGGYCGNYYHDFNDNIIP 173
PY RK E+ +MP I E+ + +D CD HD PAIV+S GGY G+ YHDF D IP
Sbjct: 115 PYPRKSENWIMPRIRELKLTSGPSDLTRSCDITHDSPAIVFSAGGYTGSIYHDFIDGFIP 174
Query: 174 LFITSRHL--AGEVQLLVTQKQRWWFGKYREIVEGLTKYEPVDLDAEQR--VRCYRRATV 229
LFIT+ + + L+V + WW KY +I+ +K++ + LD E C+ ATV
Sbjct: 175 LFITANSVYPDRDFILVVVNPKEWWMPKYIDILGTFSKHKTILLDKENASITHCFTSATV 234
Query: 230 GLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRMEEEDKSKKPRLLVINXXX 289
GL SH ++IDP + PN+ S+VDF L+ + P I++ KPRL+++
Sbjct: 235 GLISHGPMTIDPTQIPNSKSLVDFHN-LLDKALNPNLSIIKIN------KPRLILVRRYG 287
Query: 290 XXXFVNLDEIXXXXXXXXXXXXXXXL----DAHIPAAASAVNSYDAMVAVHGSGLTNLVF 345
V L+E + A + S M+ VHG+ LT L+F
Sbjct: 288 NIGRVILNEEEIREMLEDVGFEVITFRPSKTTSLREAYKLIKSSHGMIGVHGAALTQLLF 347
Query: 346 LPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYPRAHPVFLD 405
L +V++Q+VP+G + ++ + P + M + Y +Y + EES+L E Y R V D
Sbjct: 348 LRPGSVLVQIVPVG-LGWVSKTCFETPAKAMKLDYTEYRVNVEESSLIEKYSRDDLVLKD 406
Query: 406 PLPIHKQSWSLVK-DIYLGQQDVRLDVRRFR 435
P+ W++ K +YL QDVRLDV RFR
Sbjct: 407 PIAYRGMDWNVTKMKVYLKDQDVRLDVNRFR 437
>AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453
Length = 452
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 190/393 (48%), Gaps = 37/393 (9%)
Query: 54 LRCDFRDNRSDVCEMEGAIRILGRTSEVFLVAPSLASISXXXXXVNATGVDANATRWKIQ 113
+ CD D+C + G+ + +T + L+ P+ A + KI+
Sbjct: 68 ITCDRSHTNYDLCSINGSCNLDLKTGTLTLMDPTSAPLVE-----------------KIR 110
Query: 114 PYTRKGESRVMPGITEVTVRLVTADEAPPCDEWHDVPAIVYSNGGYCGNYYHDFNDNIIP 173
PY +K ++ +MP I E+T+ CD HD+PAIV+S GGY G+ YHD D IP
Sbjct: 111 PYPKKADNWIMPRIRELTLTSGPLGLPRSCDITHDLPAIVFSAGGYTGSIYHDLMDGFIP 170
Query: 174 LFITSRHLAGEVQLL--VTQKQRWWFGKYREIVEGLTKYEPV---DLDAEQRVRCYRRAT 228
LFIT+ + + + V + WW KY +I+ +K++P+ D ++ C+ A
Sbjct: 171 LFITANSVYPDRDFIPVVVNAKEWWMPKYIDILGTFSKHKPILLLDKESVATTHCFTSAI 230
Query: 229 VGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYALPREHAIRME-EEDKSKKPRLLVINX 287
VGL +H ++IDP + PN+ S+VDF L E A K+ KPRL++++
Sbjct: 231 VGLITHWPMTIDPTQIPNSKSLVDFHNLL--------EKAFTTNISTPKTHKPRLMLVSR 282
Query: 288 XXXXXFVNLDEIXXXXXXXXXXXXXXXL----DAHIPAAASAVNSYDAMVAVHGSGLTNL 343
V L+E ++ A + S MV VHG+ LT+L
Sbjct: 283 YGNIGRVILNEQEIKEMLEDVGFEVIIFRPSKTTNLKEAYKLIKSSHGMVGVHGAALTHL 342
Query: 344 VFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRYLQYNITAEESTLSEVYPRAHPVF 403
+FL ++ +QVVPLG + + Y P + M + YL+Y + EES+L E Y R V
Sbjct: 343 LFLRPGSIFVQVVPLG-LGWASKPCYESPAKTMKLEYLEYKVNVEESSLIEKYNRDDLVL 401
Query: 404 LDPLPIHKQSWSLVK-DIYLGQQDVRLDVRRFR 435
DP+ W+ K +YL +QDV LDV RFR
Sbjct: 402 KDPIAYRGMDWNATKMKVYLKEQDVSLDVNRFR 434
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,042,063
Number of extensions: 365073
Number of successful extensions: 622
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 8
Length of query: 446
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 344
Effective length of database: 8,310,137
Effective search space: 2858687128
Effective search space used: 2858687128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)