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Os06g0704600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Delta-aminolevulinic acid dehydratase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0221) R2 : 0.901
β1 : -1.81 (0.0806) R2dD : 0.112 R2D : 0.0927
β2 : 3.73 (0.0633) R2dC : 1.01 R2C : 0.331
β3 : 2.13 (0.0549) R2dE : 0.435 R2E : -0.222
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.526 (0.047) R2dN8 : 0.0372 R2N8 : 0.00301
σ : 0.412
deviance : 78.17
__
_____
C
peak time of C : 8.84
E
wheather : radiation
threshold : 0.07
memory length : 203
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.6
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
77.48 0.414 13.1 -1.84 3.67 2.09 0.652 0.56 -0.54 8.82 0.1026 216 7.72 --
78.16 0.412 13.1 -1.84 3.72 2.03 0.235 -- -0.541 8.69 0.06999 206 7.86 --
78.12 0.412 13.1 -1.82 3.72 2.14 -- 0.193 -0.544 8.88 0.09418 210 7.65 --
78.17 0.412 13.1 -1.81 3.73 2.13 -- -- -0.526 8.84 0.07 203 7.6 --
111.7 0.492 13.2 -1.89 -- 3.65 -- -0.00994 -0.576 -- 25.42 728 5.44 --
107.8 0.487 13.1 -1.92 3.33 -- 1.02 -- -0.625 6.42 -- -- -- --
110.39 0.492 13.1 -1.91 3.34 -- -- -- -0.628 6.42 -- -- -- --
109.38 0.487 13.2 -1.9 -- 3.48 -- -- -0.61 -- 78.15 757 5.85 --
163.87 0.596 13 -- 3.77 2.13 -- -- -0.394 8.7 0.009985 198 8.21 --
689.81 1.23 13.2 -1.82 -- -- -- -- -0.558 -- -- -- -- --
206.53 0.672 13.1 -- 3.31 -- -- -- -0.415 6.45 -- -- -- --
202.95 0.664 13.1 -- -- 3.57 -- -- -0.352 -- 200.3 1110 8.97 --
777.6 1.3 13.1 -- -- -- -- -- -0.355 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.24 temperature 10.0 270 > th dose dependent rect. 19 18
8 74.24 atmosphere 995.0 270 > th dose dependent rect. 13 6
23 76.02 atmosphere 995.0 270 > th dose independent rect. 14 17
27 76.20 temperature 10.0 10 > th dose dependent rect. 21 19
29 76.44 atmosphere 1000.0 270 > th dose independent rect. 13 6
33 76.61 temperature 10.0 270 > th dose dependent rect. 8 5
44 77.19 atmosphere 1000.0 10 > th dose independent rect. 14 7
45 77.31 atmosphere 995.0 10 > th dose dependent rect. 14 7
57 77.76 radiation 1.0 270 > th dose independent rect. 7 7
72 78.22 atmosphere 995.0 270 > th dose independent rect. 3 15
77 78.47 precipitation 0.1 270 < th dose independent rect. 7 7
78 78.47 precipitation 0.1 270 < th dose dependent rect. 7 7
79 78.50 temperature 30.0 270 < th dose dependent rect. 1 7
80 78.57 wind 9.0 270 < th dose independent rect. 7 7
87 78.66 temperature 15.0 270 > th dose independent rect. 7 7
89 78.71 temperature 20.0 270 > th dose independent rect. 13 6
91 78.71 atmosphere 995.0 270 > th dose independent rect. 7 7
92 78.71 atmosphere 1015.0 270 < th dose independent rect. 7 7
93 78.71 temperature 10.0 270 > th dose independent rect. 14 17
103 78.86 temperature 10.0 10 > th dose dependent rect. 10 6
111 79.01 humidity 50.0 270 > th dose independent rect. 8 5
113 79.02 wind 9.0 270 < th dose independent rect. 14 17
114 79.03 temperature 10.0 10 > th dose dependent rect. 8 8
123 79.15 wind 1.0 270 > th dose independent rect. 8 6
134 79.32 humidity 50.0 270 > th dose independent rect. 7 7
140 79.36 radiation 40.0 270 < th dose independent rect. 14 17
148 79.45 atmosphere 995.0 270 > th dose independent rect. 15 2
154 79.59 temperature 20.0 270 > th dose independent rect. 15 2
158 79.62 atmosphere 1000.0 10 > th dose independent rect. 14 20
168 79.80 radiation 1.0 270 > th dose independent rect. 14 16
189 80.13 atmosphere 995.0 10 > th dose independent rect. 16 18
194 80.20 humidity 60.0 270 > th dose independent rect. 18 9
200 80.29 wind 9.0 270 < th dose independent rect. 18 9
203 80.35 temperature 10.0 270 > th dose independent rect. 18 9
205 80.35 radiation 20.0 270 < th dose independent rect. 18 9
208 80.35 temperature 10.0 270 > th dose independent rect. 3 15
209 80.35 atmosphere 1015.0 270 < th dose independent rect. 3 15
210 80.35 radiation 10.0 270 < th dose dependent rect. 18 9
214 80.36 temperature 10.0 10 > th dose dependent rect. 10 4
217 80.40 humidity 50.0 10 > th dose independent rect. 10 6
221 80.42 humidity 50.0 270 > th dose independent rect. 19 18
222 80.42 precipitation 0.1 270 < th dose independent rect. 19 18
224 80.42 precipitation 0.1 270 < th dose dependent rect. 19 18
236 80.51 precipitation 0.1 270 < th dose independent rect. 17 22
237 80.51 precipitation 0.1 270 < th dose dependent rect. 17 22
238 80.52 precipitation 0.1 270 < th dose independent rect. 14 17
239 80.52 precipitation 0.1 270 < th dose dependent rect. 14 17
241 80.53 radiation 1.0 270 > th dose independent rect. 15 2
246 80.57 humidity 90.0 270 < th dose independent rect. 8 5
250 80.60 precipitation 0.1 270 < th dose independent rect. 18 9
251 80.60 precipitation 0.1 270 < th dose dependent rect. 18 9
258 80.68 wind 9.0 270 < th dose independent rect. 19 18
271 80.78 wind 9.0 10 < th dose independent rect. 10 6
272 80.79 wind 1.0 10 > th dose independent rect. 10 6
273 80.79 temperature 10.0 270 > th dose independent rect. 13 6
276 80.79 atmosphere 1010.0 270 < th dose independent rect. 13 6
278 80.79 temperature 10.0 270 > th dose independent rect. 19 18
279 80.79 atmosphere 995.0 270 > th dose independent rect. 19 18
283 80.81 temperature 10.0 10 > th dose independent rect. 10 6
285 80.81 atmosphere 1015.0 10 < th dose independent rect. 10 6
286 80.81 precipitation 0.1 10 < th dose independent rect. 10 6
287 80.81 temperature 10.0 10 > th dose independent rect. 16 18
288 80.81 precipitation 0.1 10 < th dose dependent rect. 10 6
289 80.82 humidity 90.0 270 < th dose independent rect. 15 2
296 80.92 wind 9.0 10 < th dose independent rect. 16 18
306 81.03 wind 9.0 270 < th dose independent rect. 13 6
322 81.15 temperature 30.0 270 < th dose independent rect. 18 9
323 81.15 wind 9.0 270 < th dose independent rect. 3 15
328 81.18 radiation 1.0 270 < th dose dependent sin 14 NA
335 81.21 radiation 1.0 10 > th dose independent rect. 10 6
349 81.30 radiation 40.0 270 < th dose independent rect. 14 3
350 81.30 atmosphere 995.0 270 > th dose independent rect. 18 9
356 81.34 wind 9.0 270 < th dose independent rect. 17 22
378 81.45 temperature 10.0 270 > th dose independent rect. 15 2
380 81.45 atmosphere 1010.0 270 < th dose independent rect. 15 2
382 81.45 temperature 10.0 270 > th dose independent rect. 17 22
386 81.50 wind 1.0 270 > th dose independent rect. 15 2
389 81.53 precipitation 0.1 270 < th dose independent rect. 13 6
392 81.53 precipitation 0.1 270 < th dose dependent rect. 13 6
400 81.62 radiation 1.0 270 > th dose independent sin 14 NA
411 81.69 radiation 1.0 270 < th dose independent sin 14 NA
413 81.70 wind 9.0 270 < th dose independent rect. 15 2
428 81.75 wind 1.0 270 > th dose independent rect. 13 6
434 81.80 precipitation 0.1 270 < th dose independent rect. 15 2
437 81.80 precipitation 0.1 270 < th dose dependent rect. 15 2
439 81.81 wind 1.0 270 > th dose dependent rect. 15 2
450 81.90 humidity 90.0 10 < th dose independent rect. 10 6
488 82.05 atmosphere 995.0 10 > th dose independent rect. 16 16
500 82.10 temperature 10.0 270 > th dose dependent rect. 19 8
510 82.13 radiation 40.0 10 < th dose independent rect. 16 18
514 82.14 radiation 40.0 10 < th dose independent rect. 14 7
529 82.21 wind 1.0 270 > th dose independent rect. 14 4
534 82.22 precipitation 0.1 10 < th dose independent rect. 16 18
536 82.22 precipitation 0.1 10 < th dose dependent rect. 16 18
572 82.32 precipitation 0.1 270 < th dose independent rect. 3 15
573 82.32 precipitation 0.1 270 < th dose dependent rect. 3 15
576 82.33 temperature 25.0 270 > th dose independent rect. 19 18
585 82.41 precipitation 0.1 270 < th dose independent rect. 14 4
587 82.41 precipitation 0.1 270 < th dose dependent rect. 14 4
605 82.49 wind 9.0 270 < th dose dependent rect. 8 6
616 82.57 wind 1.0 10 > th dose independent rect. 8 8
621 82.58 precipitation 0.1 10 < th dose independent rect. 14 7
622 82.58 precipitation 0.1 10 < th dose dependent rect. 14 7
673 82.78 humidity 90.0 270 < th dose independent rect. 14 4
674 82.78 temperature 10.0 1440 > th dose independent rect. 11 6
678 82.78 temperature 10.0 10 > th dose independent rect. 8 8
680 82.78 atmosphere 1015.0 10 < th dose independent rect. 8 8
681 82.78 precipitation 0.1 10 < th dose independent rect. 8 8
682 82.78 temperature 10.0 10 > th dose independent rect. 16 16
683 82.78 temperature 10.0 1440 > th dose independent rect. 17 18
688 82.78 precipitation 0.1 10 < th dose dependent rect. 8 8
702 82.82 atmosphere 1015.0 270 < th dose independent rect. 19 18
706 82.85 humidity 50.0 10 > th dose independent rect. 10 4
707 82.85 atmosphere 995.0 10 > th dose independent rect. 10 6
710 82.86 wind 9.0 30 < th dose independent rect. 14 7
712 82.86 wind 9.0 10 < th dose independent rect. 21 17
724 82.89 temperature 10.0 30 > th dose independent rect. 14 7
726 82.89 atmosphere 1010.0 30 < th dose independent rect. 14 7
729 82.89 temperature 10.0 30 > th dose independent rect. 21 17
730 82.89 atmosphere 995.0 30 > th dose independent rect. 21 17
751 82.92 wind 9.0 10 < th dose independent rect. 16 16
754 82.94 temperature 10.0 1440 > th dose independent rect. 15 7
757 82.94 temperature 10.0 1440 > th dose independent rect. 22 17
760 82.95 radiation 40.0 30 < th dose independent rect. 16 16
764 82.97 precipitation 0.1 270 < th dose independent rect. 8 15
765 82.97 precipitation 0.1 270 < th dose dependent rect. 8 15
769 82.99 wind 9.0 10 < th dose independent rect. 8 8
774 83.01 wind 1.0 10 > th dose independent rect. 14 7
793 83.06 atmosphere 1015.0 10 < th dose dependent rect. 10 6
808 83.11 humidity 50.0 30 > th dose independent rect. 21 17
817 83.13 temperature 10.0 270 > th dose dependent rect. 15 2
820 83.14 temperature 10.0 270 > th dose dependent rect. 14 5
848 83.21 radiation 1.0 30 > th dose independent rect. 8 8
858 83.24 wind 1.0 10 > th dose independent rect. 10 4
873 83.28 wind 9.0 270 < th dose independent rect. 23 9
874 83.28 temperature 10.0 270 > th dose independent rect. 23 9
875 83.28 temperature 30.0 270 < th dose independent rect. 23 9
876 83.28 humidity 50.0 270 > th dose independent rect. 23 9
878 83.28 atmosphere 995.0 270 > th dose independent rect. 23 9
879 83.28 temperature 10.0 270 > th dose independent rect. 8 15
885 83.30 wind 9.0 270 < th dose independent rect. 8 15
888 83.31 wind 9.0 10 < th dose independent rect. 10 4
903 83.39 radiation 1.0 10 > th dose independent rect. 10 4
918 83.45 temperature 10.0 1440 > th dose independent rect. 9 8
921 83.45 temperature 10.0 1440 > th dose independent rect. 17 16
927 83.49 humidity 50.0 10 > th dose independent rect. 16 18
928 83.50 humidity 50.0 270 > th dose independent rect. 10 1
930 83.50 temperature 20.0 10 > th dose independent rect. 16 4
933 83.51 temperature 10.0 10 > th dose independent rect. 10 4
935 83.51 atmosphere 995.0 10 > th dose independent rect. 10 4
936 83.51 atmosphere 1015.0 10 < th dose independent rect. 10 4
937 83.51 precipitation 0.1 10 < th dose independent rect. 10 4
939 83.51 temperature 10.0 10 > th dose independent rect. 14 20
941 83.51 precipitation 0.1 10 < th dose dependent rect. 10 4
947 83.53 wind 9.0 10 < th dose independent rect. 14 20
948 83.54 humidity 90.0 30 < th dose independent rect. 10 4
979 83.60 radiation 40.0 270 < th dose independent rect. 23 9
986 83.61 precipitation 0.1 10 < th dose independent rect. 16 5
991 83.61 precipitation 0.1 10 < th dose dependent rect. 16 5
997 83.62 humidity 50.0 270 > th dose independent rect. 14 17