BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0704600 Os06g0704600|AK101836
         (426 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69740.1  | chr1:26232197-26234713 FORWARD LENGTH=431          560   e-160
AT1G44318.1  | chr1:16831016-16833916 FORWARD LENGTH=407          436   e-122

>AT1G69740.1 | chr1:26232197-26234713 FORWARD LENGTH=431
          Length = 430

 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/390 (71%), Positives = 303/390 (77%), Gaps = 10/390 (2%)

Query: 45  RVSSEQEAAPAVRAPS---------GRTIEECEADAVAGRFXXXXXXXXXXXXE-GTPQI 94
           R+++ Q     VRA           G +  ECEA   AG                GTP I
Sbjct: 40  RIATSQRRNLVVRASESGNGHAKKLGMSDAECEAAVAAGNVPEAPPVPPKPAAPVGTPII 99

Query: 95  RPLDLTKXXXXXXXXXXXXXXFQETTISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRH 154
           +PL+L++              FQET ISPAN V PLFIHEGE+D PIGAMPGCYRLGWRH
Sbjct: 100 KPLNLSRRPRRNRASPVTRAAFQETDISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRH 159

Query: 155 GLLDEVYKSRDVGVNSFVLFPKVPDALKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYT 214
           GL+ EV K+R VGVNS VLFPKVP+ALK+ +GDEAYNDNGLVPRTIRLLKDK+PD+++YT
Sbjct: 160 GLVQEVAKARAVGVNSIVLFPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYT 219

Query: 215 DVALDPYSSDGHDGIVREDGVIMNDETVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIR 274
           DVALDPYSSDGHDGIVREDGVIMNDETV+QLCKQAVSQARAGADVVSPSDMMDGRVGAIR
Sbjct: 220 DVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIR 279

Query: 275 AALDAEGFHDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYRXXXXXXXX 334
           +ALDAEGF +VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYR        
Sbjct: 280 SALDAEGFQNVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIEARE 339

Query: 335 XXXXXXXILLVKPGLPYLDVIRLLRDNSALPIAAYQVSGEYSMIKAGGALNMIDEEKVMM 394
                  ILLVKPGLPYLD+IRLLRD S LPIAAYQVSGEYSMIKAGG L MIDEEKVMM
Sbjct: 340 DEAEGADILLVKPGLPYLDIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMM 399

Query: 395 ESLMCLRRAGADIILTYFARQAANVLCGMR 424
           ESLMCLRRAGADIILTYFA QAA  LCG +
Sbjct: 400 ESLMCLRRAGADIILTYFALQAATCLCGEK 429



>AT1G44318.1 | chr1:16831016-16833916 FORWARD LENGTH=407
          Length = 406

 Score =  436 bits (1121), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/334 (64%), Positives = 252/334 (75%), Gaps = 7/334 (2%)

Query: 90  GTPQI-RPLDLTKXXXXXXXXXXXXXXFQETTISPANLVLPLFIHEGEDDAPIGAMPGCY 148
            TP I +PL L++              FQET ISPAN + PLFIHEGE D PI +MPG Y
Sbjct: 71  ATPLIDQPLQLSRRARRNRKCPTQRAAFQETNISPANFIYPLFIHEGEVDIPITSMPGRY 130

Query: 149 RLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDALKSQSGDEAYNDNGLVPRTIRLLKDKFP 208
            LGWRHGL++EV ++ DVGVNS  L+PKVP+ALKS +G+EA+NDNGL+PRT+RLLKD+FP
Sbjct: 131 MLGWRHGLIEEVARALDVGVNSVKLYPKVPEALKSPTGEEAFNDNGLIPRTVRLLKDRFP 190

Query: 209 DIVVYTDVALDPYSSDGHDGIVREDGVIMNDETVYQLCKQAVSQARAGADVVSPSDMMDG 268
           D+V+YTDV  D YS+ GH GIV EDGVI+NDET++QL KQAVSQARAGADVV  S+M+DG
Sbjct: 191 DLVIYTDVNFDEYSTTGHGGIVGEDGVILNDETIHQLRKQAVSQARAGADVVCTSEMLDG 250

Query: 269 RVGAIRAALDAEGFHDVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYRXX 328
           RVGA+RAALDAEGF DVSIMSY+ KY SS YG FR+         DKKTYQ+NPAN R  
Sbjct: 251 RVGAVRAALDAEGFQDVSIMSYSVKYTSSLYGRFRKVQ------LDKKTYQINPANSREA 304

Query: 329 XXXXXXXXXXXXXILLVKPGLPYLDVIRLLRDNSALPIAAYQVSGEYSMIKAGGALNMID 388
                        IL+VKP LP LD+IRLL++ + LPI A QVSGEYSMIKA G L MID
Sbjct: 305 LLEAREDEAEGADILMVKPALPSLDIIRLLKNQTLLPIGACQVSGEYSMIKAAGLLKMID 364

Query: 389 EEKVMMESLMCLRRAGADIILTYFARQAANVLCG 422
           EEKVMMESL+C+RRAGAD+ILTYFA QAA  LCG
Sbjct: 365 EEKVMMESLLCIRRAGADLILTYFALQAATKLCG 398



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,245,734
Number of extensions: 318959
Number of successful extensions: 568
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 566
Number of HSP's successfully gapped: 2
Length of query: 426
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 325
Effective length of database: 8,337,553
Effective search space: 2709704725
Effective search space used: 2709704725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)